Rchr
J-GLOBAL ID:201801000884084626   Update date: Nov. 10, 2024

Bekker Gert-Jan

Bekker Gert-Jan
Affiliation and department:
Job title: Lecturer
Research field  (3): Biological, health, and medical informatics ,  Computational science ,  Biophysics
Papers (37):
  • Nobutaka Numoto, Fumiya Kondo, Gert-Jan Bekker, Zengwei Liao, Mitsuaki Yamashita, Akira Iida, Nobutoshi Ito, Narutoshi Kamiya, Masayuki Oda. Structural dynamics of the Ca2+-regulated cutinase towards structure-based improvement of PET degradation activity. International Journal of Biological Macromolecules. 2024. 281. 136597-136597
  • Mitsugu Araki, Toru Ekimoto, Kazuhiro Takemura, Shigeyuki Matsumoto, Yunoshin Tamura, Hironori Kokubo, Gert-Jan Bekker, Tsutomu Yamane, Yuta Isaka, Yukari Sagae, et al. Molecular Dynamics Unveils Multiple-Site Binding of Inhibitors with Reduced Activity on the Surface of Dihydrofolate Reductase. Journal of the American Chemical Society. 2024
  • Chioko Nagao, Hiroko Okuda, Gert-Jan Bekker, Atsuko Noguchi, Tsutomu Takahashi, Akio Koizumi, Shohab Youssefian, Tohru Tezuka, Shinji Akioka. Familial Episodic Pain Syndrome: A Japanese Family Harboring the Novel Variant c.2431C>T (p.Leu811Phe) in SCN11A. Biochemical Genetics. 2024
  • Gert-Jan Bekker, Kanji Oshima, Mitsugu Araki, Yasushi Okuno, Narutoshi Kamiya. Binding Mechanism between Platelet Glycoprotein and Cyclic Peptide Elucidated by McMD-Based Dynamic Docking. Journal of Chemical Information and Modeling. 2024. 64. 10. 4158-4167
  • Gert-Jan Bekker, Yoshifumi Fukunishi, Junichi Higo, Narutoshi Kamiya. Binding Mechanism of Riboswitch to Natural Ligand Elucidated by McMD-Based Dynamic Docking Simulations. ACS Omega. 2024
more...
MISC (32):
  • 三宅智哉, 西村和樹, 松田佳央理, 藤田純三, 藤田純三, 藤田純三, 難波啓一, 難波啓一, 徳山健斗, 戸谷吉博, et al. Structural and functional analysis of E. coli phosphoenolpyruvate carboxylase mutant. 日本分子生物学会年会プログラム・要旨集(Web). 2023. 46th
  • BEKKER Gert-Jan. PDBj tools and services for analyzing, editing and registering structural data. 日本蛋白質科学会年会プログラム・要旨集. 2021. 21st
  • BEKKER Gert-Jan. PDBj tools and services for analyzing and visualizing structural data. 生物物理(Web). 2021. 61. Supplement 1-2
  • 横地政志, BEKKER Gert-Jan, 栗栖源嗣. Extension of wwPDB core archive with RDF graph data model. 日本分子生物学会年会プログラム・要旨集(Web). 2021. 44th
  • Narutoshi Kamiya, Gert-Jan Bekker. Flexible Docking between Enzyme and Its Inhibitor Using Multicanonical MD Simulations and Binding Free Energy Calculations. BIOPHYSICAL JOURNAL. 2020. 118. 3. 361A-361A
more...
Books (2):
  • バイオDBとウェブツール : ラボで使える最新70選 : 知る・学ぶ・使う、バイオDX時代の羅針盤
    羊土社 2022 ISBN:9784758104067
  • どうして心臓は動き続けるの? : 生命をささえるタンパク質のなぞにせまる
    化学同人 2018 ISBN:9784759819816
※ Researcher’s information displayed in J-GLOBAL is based on the information registered in researchmap. For details, see here.

Return to Previous Page