Arimura Shin-ichi

アリムラシンイチ | Arimura Shin-ichi

Affiliation and department：
Job title： Professor
Homepage URL (1)： https://lpmg-u-tokyo.labby.jp

Research field (2)： Plant genetics and breeding , Applied molecular and cellular biology

Research keywords (6)： Genome editing in plastids , Genome editing in plant mitochondria , Plant mitochondrial fusion , Plant mitochondrial fission , Plant mitochondrial genome , Plant Mitochondria

Research theme for competitive and other funds (15)：

2024 - 2029 細胞内共生オルガネラのゲノム制御:技術革新から生命現象の理解と応用へ
2024 - 2029 細胞質ゲノム編集と遺伝子導入技術の開発
2020 - 2025 Establishment of the basis for plant mitochondrial genome breeding
2019 - 2022 Introduction of genes including CMS into plant mitochondria
2018 - 2022 Creation of male sterile cytoplasm by plant mitochondrial genome editing

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Papers (81)：

Dehaene Noémie, Boussardon Clément, Andrey Philippe, Charif Delphine, Brandt Dennis, Gilouppe Taillefer Clémence, Nietzel Thomas, Ricou Anthony, Simon Matthieu, Tran Joseph, et al. The mitochondrial orf117Sha gene desynchronizes pollen development and causes pollen abortion in the Arabidopsis Sha CMS. Journal of experimental botany. 2024
Shin-Ichi Arimura, Iris Finkemeier, Kristina Kühn, Mizuki Takenaka. Multilayered Regulation of Plastids and Mitochondria. Plant & cell physiology. 2024
Fengyuan Xu, Tongbing Su, Xiaochen Zhang, Lei Qiu, Xiaodong Yang, Nobuya Koizuka, Shin-Ichi Arimura, Zhongyuan Hu, Mingfang Zhang, Jinghua Yang. Editing of ORF138 restores fertility of Ogura cytoplasmic male sterile broccoli via mitoTALENs. Plant biotechnology journal. 2024
Alessandro Nicolia, Nunzia Scotti, Nunzio D’Agostino, Giovanna Festa, Lorenza Sannino, Gaetano Aufiero, Shin-ichi Arimura, Teodoro Cardi. Mitochondrial DNA editing in potato through mitoTALEN and mitoTALECD: molecular characterization and stability of editing events. Plant Methods. 2024
Chang Zhou, Miki Okuno, Issei Nakazato, Nobuhiro Tsutsumi, Shin-Ichi Arimura. Targeted A-to-G base editing in the organellar genomes of Arabidopsis with monomeric programmable deaminases. Plant physiology. 2023

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MISC (64)：

中里一星, 奥野未来, 伊藤武彦, 堤伸浩, 有村慎一. Targeted C-to-T base editing in the Arabidopsis plastid genome by a highly active type of ptpTALECD. 育種学研究. 2023. 25
小坂七海, 奥野未来, 中里一星, 原田佳樹, 豊田敦, 伊藤武彦, 堤伸浩, 有村慎一. Development of a method for organelle-specific random mutagenesis by a mutation on the exonuclease domain of A. thaliana DNA polymerase I. 育種学研究. 2023. 25
小坂七海, 原田佳樹, 中里一星, 奥野未来, 伊藤武彦, 矢守航, 堤伸浩, 有村慎一. Development a technology for the induction of plant-organelle-genome-specific random mutagenesis in 2 ways. 育種学研究. 2023. 25
Hiroyuki Ichida, Tomohiko Kazama, Shin Ichi Arimura, Kinya Toriyama. The mitochondrial and plastid genomes of Oryza sativa L. cv. Taichung 65. Plant Biotechnology. 2023. 40. 1. 109-112
中里一星, 有村慎一. 葉緑体と植物ミトコンドリアのゲノム編集-Genome editing of chloroplast and mitochondrial genomes of plants. アグリバイオ = Agricultural biotechnology. 2022. 6. 9. 812-814

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Patents (3)：

Genome editing for plant mitochondria
植物ゲノムの編集方法
ゲノム編集技術

Books (3)：

ゲノム編集技術を応用した製品開発とその実用化
技術情報協会 2021 ISBN:9784861048272
Rice Genomics, Genetics and Breeding.
Springer Nature 2018
Molecular Cell Biology of the Growth and Differentiation of Plant Cells
CRC press 2016

Lectures and oral presentations (9)：

Targeted base editing in the plastid genome of Arabidopsis thaliana with a highly active base editor
(Chloroplast Biotechnology Gordon Research Conference 2023)
Targeted A-to-G base editing in chloroplast and mitochondrial genomes in Arabidopsis thaliana.
(日本育種学会第143回講演会(令和5年度春季大会) 2023)
高活性型のptpTALECDによる、シロイヌナズナ葉緑体ゲノム上の標的シトシンのチミンへの置換
(日本育種学会第143回講演会(令和5年度春季大会) 2023)
TALEドメインによるDNA配列認識を介したシロイヌナズナ核遺伝子の標的一塩基置換
(第64回日本植物生理学会 2023)
Targeted A-to-G base editing in chloroplast and mitochondrial genomes in Arabidopsis thaliana.
(第64回日本植物生理学会 2023)

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Education (1)：

1997 - 2002 University of Tokyo Graduate School of Agricultural and Life Sciences

Professional career (1)：

博士(農学) (東京大学)

Work history (6)：

2024/02 - 現在 The University of Tokyo Graduate School of Agricultural and Life Sciences Professor
2011/04 - 2024/01 University of Tokyo Graduate School of Agricultural and Life Sciences Associate Professor
2012/10 - 2016/03 JST PRESTO
2004/11 - 2011/03 University of Tokyo Graduate School of Agricultural and Life Sciences Research Associate
2007/08 - 2009/02 University of Utah Department of Biochemistry Visiting Researcher

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Committee career (6)：

2023 - 現在日本ミトコンドリア学会評議員・監事
2022/01 - 現在 Plant Physiology Monitoring Editor
2022/04 - 2026/03 日本育種学会代議員
2022 - 2026 日本植物バイオテクノロジー学会理事(国際化担当/国際化委員長)
2022/01 - 2025/12 日本植物生理学会代議員

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Awards (4)：

2021/09 - Japanese society for plant biotechnology 2021 Biotechnology Group Award
2013/03 - 2013年度日本植物生理学会奨励賞
2012/04 - 平成24年度文部科学大臣表彰若手科学者賞
2011/09 - 日本植物細胞分子生物学会奨励賞

Association Membership(s) (5)：

日本ミトコンドリア学会 , American Society for the Plant Biology , THE JAPANESE SOCIETY OF PLANT PHYSIOLOGISTS , JAPANESE SOCIETY OF BREEDING , JAPANESE SOCIETY FOR PLANT BIOTECHNOLOGY

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