Research field (4)：
Biomedical engineering
, Basic mathematics
, Computational science
, Software
Research keywords (5)：
Systems Biology
, Mathematical models
, Physiome
, Time Series Analysis
, simulation
Research theme for competitive and other funds (2)：
2021 - 2024 睡眠時における大脳皮質領域間の相互作用を定量する指標の提案
2016 - 2019 Versatile simulation platform bridging insilco simulation and devices in the real world
Papers (19)：
Mihara, Y., Maekawa, R., Sato, S., Shimizu, N., Doi-Tanaka, Y., Takagi, H., Shirafuta, Y., Shinagawa, M., Tamura, I., Taketani, T., et al. An integrated genomic approach identifies HOXC8 as an upstream regulator in ovarian endometrioma. Journal of Clinical Endocrinology and Metabolism. 2020. 105. 12
Takeshi Abe, Yoshiyuki Asai. Flint: a simulator for biological and physiological models in ordinary and stochastic differential equations. J. Open Source Softw. 2020. 5. 53. 2331-2331
Takeshi Abe, Yoshiyuki Asai, Masashi Dotare, Takahide Hayano, Stephen H. Perrig, Manon Jaquerod, Alessandra Lintas, Alessandro E. P. Villa. Causal Interactions Among Cortical Regions During Sleep Based on fNIRS Recordings. Advances in Cognitive Neurodynamics (VII). 2021. 273-274
Yuichi Ogoshi, Masao Okita, Takeshi Abe, Yoshiyuki Asai, Hiroaki Kitano, Kenichi Hagihara. Efficient data transfer between CPU and GPU for large-scale biophysical simulation on GPU cluster. IPSJ SIG Notes. 2013. 2013. 31. 1-7
Phase coupling in interaction networks of neural mass models of cortical columns.
(14th International Neural Coding Workshop (NC2021) 2021)
Causal Interactions Among Cortical Regions During Sleep Based On fNIRS Recordings.
(The 7th International Congress on Cognitive Neurodynamics (ICCN 2019) 2019)
A branch-and-bound method of grid search to estimate parameters of biological models.
(40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC'18) 2018)
