Nagano Nozomi

ナガノノゾミ | Nagano Nozomi

Affiliation and department：

Research field (4)： Biological, health, and medical informatics , Systems genomics , Structural biochemistry , Molecular biochemistry

Research keywords (4)： ribosomal peptide , bioinformatics , protein , enzyme

Research theme for competitive and other funds (3)：

2016 - 2019 Bioinformatics analyses to search for ribosomal peptide biosynthetic genes from filamentous fungi
2011 - 2013 Development of novel algorithm to detect enzyme active-sites considering cofactors
2005 - 2007 Systematic analyses and development of classification for catalytic mechanisms of oxidoreductase enzymes based on structural information

Papers (31)：

Nozomi Nagano, Narumi Tokunaga, Masami Ikeda, Hiroko Inoura, Duong A. Khoa, Makoto Miwa, Mohammad G. Sohrab, Goran Topić, Mari Nogami-Itoh, Hiroya Takamura. A novel corpus of molecular to higher-order events that facilitates the understanding of the pathogenic mechanisms of idiopathic pulmonary fibrosis. Scientific Reports. 2023. 13. 1
Mohammad Golam Sohrab, Khoa Duong, Goran Topić, Masami Ikeda, Nozomi Nagano, Yayoi Natsume-Kitatani, Masakata Kuroda, Mari Itoh, Hiroya Takamura. Disease Network Constructor: a Pathway Extraction and Visualization. Proceedings of the 61st Annual Meeting of the Association for Computational Linguistics (Volume 3: System Demonstrations). 2023
長野希美, 池田修己, 三輪誠, 坂田一郎, 浅谷公威, 大知正直, 市瀬龍太郎. 人工知能による科学技術研究の加速. 人工知能. 2019. 34. 6. 783-789
Ying Ye, Atsushi Minami, Yuya Igarashi, Miho Izumikawa, Myco Umemura, Nozomi Nagano, Masayuki Machida, Teppei Kawahara, Kazuo Shin-ya, Katsuya Gomi, et al. Unveiling the Biosynthetic Pathway of the Ribosomally Synthesized and Post-translationally Modified Peptide Ustiloxin B in Filamentous Fungi. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION. 2016. 55. 28. 8072-8075
Akira Yoshimi, Myco Umemura, Nozomi Nagano, Hideaki Koike, Masayuki Machida, Keietsu Abe. Expression of ustR and the Golgi protease KexB are required for ustiloxin B biosynthesis in Aspergillus oryzae. AMB EXPRESS. 2016. 6

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MISC (10)：

長野希美, 梅村舞子, 泉川美穂, 河野仁, 石井智子, 菊池東, 富井健太郎, 熊谷俊高, 吉見啓, 町田雅之, et al. 糸状菌環状ペプチドustiloxin合成に関与する新規酵素の同定. 日本蛋白質科学会年会プログラム・要旨集. 2015. 15th. 136
梅村舞子, 長野希美. 糸状菌におけるリボソームペプチド生合成経路の発見新規糸状菌二次代謝経路の発見と展望. 化学と生物. 2015. 53. 5. 273-276
吉見啓, 梅村舞子, 長野希美, 小池英明, 町田雅之, 阿部敬悦. 麹菌におけるustR遺伝子高発現によるUstiloxin B生産とUstiloxin B生合成におけるKexBプロテアーゼの関与. 日本農芸化学会大会講演要旨集(Web). 2015. 2015. 2A32P03 (WEB ONLY)
田中光, 佐野元昭, 油谷幸代, 長野希美, 浅井潔, 梅村舞子, 町田雅之, 砂川忠広, 小路博志, 相澤正幸, et al. 麹菌における遺伝子間の推定制御ネットワークを利用した新規コウジ酸生合成遺伝子の探索. 日本生物工学会大会講演要旨集. 2014. 66th. 125
梅村舞子, 玉野孝一, 小池英明, 池上努, 稲次豊広, 長野希美, 油谷幸代, 熊谷俊高, 寺井悟朗, 津久井隆裕, et al. 化合物の高生産とデザインに向けた大規模生物情報の複合利用. 日本生物工学会大会講演要旨集. 2014. 66th. 93

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Patents (3)：

Lectures and oral presentations (4)：

Parametric Templates: A New Enzyme Active-Site Prediction Algorithm.
(ICDMW 2010, The 10th IEEE International Conference on Data Mining Workshops, Sydney, Australia, 13 December 2010 2010)
2P-238 Functional classification of enzymes by clustering of subsequences consisting of active sites and ligand interaction sites(Bioinformatics:Functional genomics,The 47th Annual Meeting of the Biophysical Society of Japan)
(Seibutsu Butsuri 2009)
2P-295 Analysis of structural and sequence features determining enzyme specificities(The 46th Annual Meeting of the Biophysical Society of Japan)
(Seibutsu Butsuri 2008)
1P242 Protein function prediction using structural and sequence information about enzyme reaction mechanisms and substrate specificity(Bioinformatics-structural genomics,Poster Presentations)
(Seibutsu Butsuri 2007)

Works (1)：

Professional career (1)：

Committee career (4)：

Association Membership(s) (4)：

THE PHARMACEUTICAL SOCIETY OF JAPAN , THE BIOPHYSICAL SOCIETY OF JAPAN , JAPANESE SOCIETY FOR BIOINFORMATICS , PROTEIN SCIENCE SOCIETY OF JAPAN

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