Rchr
J-GLOBAL ID：201801007397526243
Update date: Jun. 22, 2025
Arimura Shin-ichi
アリムラ シンイチ | Arimura Shin-ichi
Affiliation and department：
Job title：
Professor
Homepage URL (1)：
https://lpmg-u-tokyo.labby.jp
Research field (2)：
Plant genetics and breeding
, Applied molecular and cellular biology
Research keywords (6)：
Genome editing in plastids
, Genome editing in plant mitochondria
, Plant mitochondrial fusion
, Plant mitochondrial fission
, Plant mitochondrial genome
, Plant Mitochondria
Research theme for competitive and other funds (19)：
- 2024 - 2029 Manipulating Genomes of Intracellular Symbiotic Organelles: Advancements in Technology, Applications for Fundamental Sciences, and Beyond.
- 2024 - 2029 細胞内共生オルガネラのゲノム制御:技術革新から生命現象の理解と応用へ
- 2024 - 2029 細胞質ゲノム編集と遺伝子導入技術の開発
- 2020 - 2025 Establishment of the basis for plant mitochondrial genome breeding
- 2022 - 2024 植物オルガネラを自由かつ高精度に改変するゲノム編集技術の開発
- 2019 - 2022 Introduction of genes including CMS into plant mitochondria
- 2018 - 2022 Creation of male sterile cytoplasm by plant mitochondrial genome editing
- 2020 - 2022 mitoTALEN法を用いた植物ミトコンドリアゲノム修復と細胞質雄性不稔の解析
- 2016 - 2019 Research and development of artificial fertility restorer genes using the new plant breeding techniques.
- 2016 - 2018 Trials of CRISPR/Cas9 for plant mitochondrial genome editing
- 2012 - 2016 Analysis of the morphology and number of plant mitochondria
- 2012 - 2015 植物ミトコンドリアゲノム人為改変技術と雄性不稔植物の作出
- 2011 - 2012 植物メリステムにおけるミトコンドリアとそのゲノムの維持機構
- 2010 - 2011 Physiological analysis of plant mitochondrial fusion and search for genes contributing to the phenomenon
- 2006 - 2010 Dynamics of mitochondria in the reproduction strategy of higher plants
- 2005 - 2008 The role of mitochondria in programmed cell death in higher plants
- 2005 - 2006 高等植物ミトコンドリアゲノム構成とその維持機構の解明
- 2002 - 2004 高等植物オルガネラ分裂機構の解明とオルガネラ形質転換への応用
- 1999 - 2001 核ゲノムの形質転換によるイネ葉緑体の機能強化に関する分子育種学的研究
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Papers (90)：
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Ko Imaizumi, Shin-Ichi Arimura, Kentaro Ifuku. The lumenal domain of Cyt b559 interacting with extrinsic subunits is crucial for accumulation of functional photosystem II. Photosynthesis research. 2025. 163. 3. 33-33
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Rachele Tamburino, Nunzio D'Agostino, Gaetano Aufiero, Alessandro Nicolia, Angelo Facchiano, Deborah Giordano, Lorenza Sannino, Rosa Paparo, Shin-Ichi Arimura, Nunzia Scotti, et al. Mitochondrial gene editing and allotopic expression unveil the role of orf125 in the induction of male fertility in some Solanum spp. hybrids and in the evolution of the common potato. Plant biotechnology journal. 2025. 23. 5. 1862-1875
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Issei Nakazato, Shin-ichi Arimura. Targeted C-to-T Base Editing in the Arabidopsis Plastid Genome. Current Protocols. 2025. 5. 1
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Muralikrishna Narra, Issei Nakazato, Brittany Polley, Shin-Ichi Arimura, Grant N Woronuk, Pankaj K Bhowmik. Recent trends and advances in chloroplast engineering and transformation methods. Frontiers in plant science. 2025. 16. 1526578-1526578
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Fumiko Ishizuna, Ukin Yo, Natsumi Yoshimura, Atsushi Shirai, Toshihiro Aono, Nobuhiro Tsutsumi, Shin-Ichi Arimura, Hideki Takanashi. Structural changes in Nelumbo flower petals during opening and closing. American journal of botany. 2024. 111. 11. e16433
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MISC (69)：
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山崎明歩, 三沢昴輝, 澤井里歩, 旭文輝, 竹中瑞樹, 中里一星, 有村慎一, 四井いずみ, 太治輝昭, 坂田洋一. mitoTALECDを用いたシロイヌナズナの重金属ストレスにおけるミトコンドリアRNA編集の役割解析. 日本植物学会大会研究発表記録(CD-ROM). 2024. 88th
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中里一星, 矢守航, 松村浩由, 奥野未来, 堤伸浩, 有村慎一. Resistance to the herbicide metribuzin conferred to Arabidopsis thaliana by targeted base editing of the chloroplast genome. 育種学研究. 2024. 26
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小坂七海, 原田佳樹, 中里一星, 奥野未来, 伊藤武彦, 堤伸浩, 有村慎一. Development of a technology for induction of plant-organelle-genome-specific random mutagenesis by artificially-fused proteins. Evaluation of T1 plants. 育種学研究. 2024. 26
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廣田加奈子, 松田(今井)典子, 福井崇弘, 室智大, 西野耕平, 小迫英尊, 庄司佳祐, 庄司佳祐, 高梨秀樹, 藤井毅, et al. ボルバキアがアワノメイガで引き起こすオス殺しの原因因子Oscarに関する研究. 蚕糸・昆虫機能利用学術講演会・日本蚕糸学会大会講演要旨集. 2024. 94th
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廣田加奈子, 松田(今井)典子, 福井崇弘, 室智大, 西野耕平, 小迫英尊, 庄司佳祐, 高梨秀樹, 藤井毅, 有村慎一, et al. ボルバキアがアワノメイガにおいて引き起こすオス殺し現象の原因因子の同定. 日本応用動物昆虫学会大会講演要旨. 2023. 67th
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Patents (5)：
Books (3)：
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ゲノム編集技術を応用した製品開発とその実用化
技術情報協会 2021 ISBN:9784861048272
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Rice Genomics, Genetics and Breeding.
Springer Nature 2018
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Molecular Cell Biology of the Growth and Differentiation of Plant Cells
CRC press 2016
Lectures and oral presentations (9)：
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Targeted base editing in the plastid genome of Arabidopsis thaliana with a highly active base editor
(Chloroplast Biotechnology Gordon Research Conference 2023)
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Targeted A-to-G base editing in chloroplast and mitochondrial genomes in Arabidopsis thaliana.
(日本育種学会第143回講演会(令和5年度春季大会) 2023)
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高活性型のptpTALECDによる、シロイヌナズナ葉緑体ゲノム上の標的シトシンのチミンへの置換
(日本育種学会第143回講演会(令和5年度春季大会) 2023)
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TALEドメインによるDNA配列認識を介したシロイヌナズナ核遺伝子の標的一塩基置換
(第64回日本植物生理学会 2023)
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Targeted A-to-G base editing in chloroplast and mitochondrial genomes in Arabidopsis thaliana.
(第64回日本植物生理学会 2023)
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Education (1)：
- 1997 - 2002 University of Tokyo Graduate School of Agricultural and Life Sciences
Professional career (1)：
Work history (11)：
- 2024/02 - 現在 The University of Tokyo Graduate School of Agricultural and Life Sciences Professor
- 2025 - Shizuoka University
- 2025 - Rikkyo University
- 2011/04 - 2024/01 University of Tokyo Graduate School of Agricultural and Life Sciences Associate Professor
- 2024 - Kobe University
- 2024 - University of Tsukuba
- 2022 - University of Tsukuba
- 2012/10 - 2016/03 JST PRESTO
- 2004/11 - 2011/03 University of Tokyo Graduate School of Agricultural and Life Sciences Research Associate
- 2007/08 - 2009/02 University of Utah Department of Biochemistry Visiting Researcher
- 2002/04 - 2004/10 University of Tokyo Graduate School of Agricultural and Life Sciences PostDoc
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Committee career (6)：
- 2023 - 現在 日本ミトコンドリア学会 評議員・監事
- 2022/01 - 現在 Plant Physiology Monitoring Editor
- 2022/04 - 2026/03 日本育種学会 代議員
- 2022 - 2026 日本植物バイオテクノロジー学会 理事(国際化担当/国際化委員長)
- 2022/01 - 2025/12 日本植物生理学会 代議員
- 2023/06 - 2024/06 Science Committee Member for ICPMB2024 in France (https://icpmb-2024.sciencesconf.org)
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Awards (5)：
- 2025/04 - 令和七年度文部科学大臣表彰(科学技術賞・研究部門)
- 2021/09 - Japanese society for plant biotechnology 2021 Biotechnology Group Award
- 2013/03 - 2013年度日本植物生理学会奨励賞
- 2012/04 - 平成24年度文部科学大臣表彰若手科学者賞
- 2011/09 - 日本植物細胞分子生物学会奨励賞
Association Membership(s) (5)：
日本ミトコンドリア学会
, American Society for the Plant Biology
, THE JAPANESE SOCIETY OF PLANT PHYSIOLOGISTS
, JAPANESE SOCIETY OF BREEDING
, JAPANESE SOCIETY FOR PLANT BIOTECHNOLOGY
