Research field (1)：
Pharmaceuticals - analytical and physicochemistry
Research keywords (5)：
Proteomics
, Post-Translational Modification
, Mass Spectrometry
, Separation Science
, HPLC
Research theme for competitive and other funds (35)：
2023 - 2028 Shin-biology regulated by protein lifetime
2024 - 2027 精密メタプロテオーム解析を実現する高度情報科学基盤の構築
2022 - 2026 Pathophysiological study of NMD-targeted transcripts by trans-omics analysis
2022 - 2025 メタオミクスと質量分析イメージングによる根尖性歯周炎の再発マーカー因子探索
2021 - 2024 Large-scale proteoform analysis for unveiling the entire view
2020 - 2022 Spatio-temporal proteomics based on MS silencing
2019 - 2022 Analysis of metabolic adaptation and three-dimensional structure changes caused by regenerative therapy with FGF-2.
2018 - 2021 Identification of factors inducing hepatic glucose and lipid metabolism abnormalities via intestine and portal vein by periodontal infection using omics analysis.
2017 - 2020 Identification of endogenous kinase substrates for analyzing intracellular signaling pathway
2015 - 2020 Regulation of Polycomb activities in floral stem cell control
2019 - 2020 Development and application of the novel protein sequence identification resource by high-speed character string search and RDF
2017 - 2019 タンパク質新生鎖の末端プロテオーム解析
2016 - 2019 Development of mass peak picking method by deep learning
2015 - 2019 Functional analysis of monocyte-lineage blood cells and control of damage-associated molecular patterns (DAMPs) under the whole-body responses to injury/illness
2018 - 2019 Development and application of the novel protein/nucleic acid sequence identification resource by high-speed character string search and RDF
2016 - 2018 Shotgun proteomics beyond trypsin
2015 - 2018 定量リン酸化プロテオミクスによる大規模リン酸化ストイキオメトリー解析
2015 - 2018 Development of ultra sensitive CE-ESI-MS methods based on the nano-focusng stratedy
2014 - 2018 A study on the common pathogenesis of Parkinson's disease as a mitochondrial disease
2017 - 2018 Development of the novel protein identification resource by high-speed character string search and RDF
2015 - 2017 脂肪細胞分化過程における脂質修飾プロテオームの時空間解析
2014 - 2016 アセチル化修飾と制御酵素の大規模相関解析
2014 - 2016 Complete Analysis of Human Proteome by Deep Proteomics
2013 - 2016 Establishment of quantitation method for proteome-based phospho-signaling pathway and its application for prediction of drug effect monitoring
2013 - 2016 Development of anti-inflammatory drugs by targeting vesicular traffic in dendritic cells
2012 - 2015 Elucidation of intracellular phosphorylation network for molecular targeting drug discovery
2011 - 2015 Functional analysis of bone marrow-derived cells on control of the whole-body responses to injury/illness, regeneration and tissue restoration
2012 - 2014 マルチ翻訳後修飾プロテオミクスによる代謝・転写システムの大規模解析
2012 - 2014 Enrichment of low abundant proteome in plasma
2012 - 2013 定量リン酸化プロテオミクスを用いたバクテリアの病原性シグナルの解明
2010 - 2012 Proteomic analysis of phosphorylation in leukemic cells
2010 - 2012 Membrane proteomic analysis of cancer tissue for identification of biomarkers for early diagnosis
2010 - 2012 Proteomic analysis of micro RNA target proteins involved in cancer metastasis
2009 - 2011 Interactome analysis of protein kinases
2008 - 2010 Comprehensive analysis of protein turnover
Show all
Papers (291)：
Shujiro Okuda, Akiyasu C Yoshizawa, Daiki Kobayashi, Yushi Takahashi, Yu Watanabe, Yuki Moriya, Atsushi Hatano, Tomoyo Takami, Masaki Matsumoto, Norie Araki, et al. jPOST environment accelerates the reuse and reanalysis of public proteome mass spectrometry data. Nucleic Acids Research. 2024
Tsuyoshi Tabata, Akiyasu C Yoshizawa, Kosuke Ogata, Chih-Hsiang Chang, Norie Araki, Naoyuki Sugiyama, Yasushi Ishihama. UniScore, a unified and universal measure for peptide identification by multiple search engines. 2024
Ryosuke Mizuta, Eisuke Kanao, Keigo Ukyo, Shusuke Kuwada, Shin-Ichi Sawada, Yasushi Ishihama, Kazunari Akiyoshi, Yoshihiro Sasaki. A Direct Approach for Living Biomembrane Printing on a Nanoparticle. Nano letters. 2024
Kazuya Morikawa, Hiroshi Nishida, Koshi Imami, Yasushi Ishihama. One-step N-terminomics based on isolation of protein N-terminal peptides from LysargiNase digests by tip-based strong cation exchange chromatography. Molecular & cellular proteomics : MCP. 2024. 100820-100820
Eisuke Kanao, Shunsuke Tanaka, Ayana Tomioka, Tetsuya Tanigawa, Takuya Kubo, Yasushi Ishihama. High-Recovery Desalting Tip Columns for a Wide Variety of Peptides in Mass Spectrometry-based Proteomics. 2024
高橋悠志, 吉沢明康, 小林大樹, 守屋勇樹, 幡野敦, 高見知代, 松本雅記, 荒木令江, 田畑剛, 田畑剛, et al. Accelerating data re-analysis in jPOST using metadata from JPDM data papers. 日本プロテオーム学会大会プログラム・抄録集. 2024. 2024 (Web)
津曲和哉, 磯部洋輔, 磯部洋輔, 磯部洋輔, 石濱泰, 石濱泰, 清田純, 有田誠, 有田誠, 有田誠, et al. Liquid-liquid extraction for proteomics of lipid-modified sites. 日本プロテオーム学会大会プログラム・抄録集. 2023. 2023 (CD-ROM)
花田毅己, 金尾英佑, 金尾英佑, 村岡賢, 今見考志, 杉山直幸, 足立淳, 足立淳, 石濱泰, 石濱泰. Exploration of BRAF V600E Substrates by Phosphoproteome and Interactome Analysis. 日本プロテオーム学会大会プログラム・抄録集. 2023. 2023 (CD-ROM)
森川和哉, 西田紘士, 今見考志, 今見考志, 石濱泰, 石濱泰. One-step enrichment of protein terminal peptides using pipette tip columns for protein terminomics. 質量分析総合討論会講演要旨集. 2023. 71st
2023/05 - 現在 Mass Spectrometry Society of Japan President
2023/03 - 現在 Division of Physical Sciences, the Pharmaceutical Society of Japan VIce President
2023/01 - 現在 Asia Oceania Human Proteome Organisation (AOHUPO) Vice President
2022/11 - 現在 Journal of Pharmaceutical and Biomedical Analysis Open Journal of Pharmaceutical and Biomedical Analysis Open, Editorial Board
2021/12 - 現在 DNA Research Editor
2019/09 - 現在 Journal of Proteome Data and Methods Editor in chief
2013/07 - 現在 Molecular and Cellular Proteomics Editorial Board
2012/01 - 現在 The Society for Chromatographic Sciences Council
1999 - 現在 The Division of Electrophoresis, the Japan Society for Analytical Chemistry Council
2020/03 - 2024/02 The Division of Electrophoresis, the Japan Society for Analytical Chemistry Chairperson
2021/05 - 2023/05 The Mass Spectrometry Society of Japan Council
2019/04 - 2023/04 The Japan Society for Analytical Chemistry. VIce President
2017/01 - 2022/12 Asia Oceania Human Proteome Organisation (AOHUPO) Executive Council
2018/01 - 2020/12 Japanese Proteomics Society President
2018/02 - 2020/03 Kyoto Biomolecular Mass Spectrometry Society President
2017/01 - 2019/12 The Human Proteome Organization (HUPO) Council
2005 - CBI Journal Editorial Board
1999 - Journal of Chromatography A Editorial Board
Show all
Awards (8)：
2022/07 - The Japanese Biochemical Society Journal of Biochemistry Award Quantitative nascent proteome profiling by dual-pulse labelling with O-propargyl-puromycin and stable isotope-labelled amino acids
2022/06 - The Mass Spectrometry Society of Japan MSSJ AWARD for Excellent Paper Effect of Phosphorylation on the Collision Cross Sections of Peptide Ions in Ion Mobility Spectrometry
2021/09 - The Japan Society for Analytical Chemistry JSAC Award
2020/11 - The Terabe Shigeru Prize
2018/11 - The Society for Chromatographic Sciences SCS Award
2013/09 - Japanese Proteomics Society Japanese Proteomics Society Award for Distinguished Achievement in Proteomics Sciences
2011/05 - Mass Spectrometry Society of Japan MSSJ Research Award
2009/05 - Mass Spectrometry Society of Japan MSSJ Award for Excellent Article
Show all
Association Membership(s) (10)：
THE JAPAN SOCIETY FOR ANALYTICAL CHEMISTRY
, American Society for Biochemistry and Molecular Biology
, Human Proteome Organization
, American Society for Mass Spectrometry
, THE MOLECULAR BIOLOGY SOCIETY OF JAPAN
, THE JAPANESE BIOCHEMICAL SOCIETY
, THE PHARMACEUTICAL SOCIETY OF JAPAN
, Society for Chromatographic Sciences
, THE MASS SPECTROMETRY SOCIETY OF JAPAN
, Japanese Proteomics Society
