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J-GLOBAL ID：200901018729077270 Update date: Mar. 24, 2025

Sumi Tomonari

スミトモナリ | Sumi Tomonari

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Affiliation and department：
Job title： Professor
Homepage URL (2)： https://rdsoran.muroran-it.ac.jp/html/200000540_ja.html , https://rdsoran.muroran-it.ac.jp/html/200000540_en.html

Research field (4)： Biological, health, and medical informatics , Biophysics , Bio-, chemical, and soft-matter physics , Basic physical chemistry

Research keywords (27)： Neural network , salt chemotaxis , Caenorhabditis elegans , Muscarinic acetylcholine receptor , Alzheimer's disease , Mathematical model , Persistent viral infection , Long COVID , Immune response , SARS-CoV-2 , Autotroph , Last Universal Common Ancestor (LUCA) , Metabolic evolution , Carbon metabolism , Hippocampus , Synapse plasticity , Protein folding , Protein , Solvent effect , Molecular Motor , Stochastic Modeling , Density-functional Theory , Soft Matter Physics , Biophysics , Chemical Physics , Liquid State Theory , Statistical mechanics

Research theme for competitive and other funds (14)：

2022 - 2026 Study on the origin of sustained drug releasability of polymeric nanomicelles based on clarifying the interaction potential surface
2024 - 線虫C. elegansの育成環境記憶に依存した味覚嗜好性に関するニューラルネットワークシミュレーション解析
2023 - 2024 新型コロナ後遺症の原因となる宿主内持続感染の予防法並びに治療法の細胞免疫学的研究
2020 - 2023 Verification of the hydrophobic interaction hypothesis in protein structural stability and theoretical/experimental study on cosolvent effects
2018 - 2023 Understanding solvent-mediated forces with diverse responses to ions, co-solvents, and temperature

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Papers (69)：

Masakatsu Hironaka, Tomonari Sumi. A neural network model that generates salt concentration memory-dependent chemotaxis in Caenorhabditis elegans. elife. 2025. 14. RP104456
Yoshihiro Osaka, Ryuichi Okamoto, Tomonari Sumi, Kenichiro Koga, Hiroshi Imamura, Tsuyoshi Shirai, Yasuhiro Isogai. Mechanism of polymer molecular weight-dependent suppression and promotion of liquid-liquid phase separation of a protein solution by the addition of polymer. The Journal of Chemical Physics. 2025. 162. 5. 051101-1-051101-8
Hidefumi Naito, Tomonari Sumi, Kenichiro Koga. The nature of the hydrophobic interaction varies as the solute size increases from methane’s to C60’s. The Journal of Chemical Physics. 2024. 161. 21. 214501-1-214501-14
Tomonari Sumi, Kouji Harada. Vaccine and antiviral drug promise for preventing post-acute sequelae of COVID-19, and their combination for its treatment. Frontiers in Immunology. 2024. 15. 1329162-1-1329162-20
Takeshi Morita, Yusuke Torii, Hiroshi Imamura, Teruki Kadota, Fumie Sakuma, Kenjirou Higashi, Tomonari Sumi. Pair Potential between Poloxamer 407 Micelles in 14 wt % Aqueous Solution Clarifying the Sol-Gel-Sol Transition by Temperature Rise. The Journal of Physical Chemistry Letters. 2024. 7909-7915

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MISC (13)：

Masakatsu Hironaka, Tomonari Sumi. A neural network model that generates salt concentration memory-dependent chemotaxis in Caenorhabditis elegans. 2024
墨智成, 今村比呂志. タンパク質は疎水効果で安定化しているのか. 月刊「アグリバイオ」4月号 (月刊「細胞」 Vol. 55, 162-165からの転載). 2023. 7. 4. 372-377
墨智成, 今村比呂志. タンパク質は疎水効果で安定化しているのか?. 月刊「細胞」3月号. 2023. 55. 2. 162-165
墨智成. 新型コロナ後遺症と宿主内持続感染新型コロナ後遺症に関する仮説. 「BAN」3月号. 2023. 286. 56-63
墨智成. タンパク質構造安定性機序の新たな理解〜水は疎水基を嫌っていなかった〜. 化学と工業. 2022. 75. 11. 803-803

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Books (1)：

タンパク質の構造解析手法とIn silicoスクリーニングへの応用事例
技術情報協会 2023 ISBN:9784861049712

Lectures and oral presentations (4)：

水中の個別イオンの部分モル体積に基づく電荷スケールイオンモデルの開発
(日本物理学会第79回年次大会 2024)
疎水性相互作用の溶質サイズ依存性を定める熱力学的及び微視的要因
(日本物理学会第79回年次大会 2024)
二つのイオン特異的効果の関係性:塩析と塩誘起有効相互作用
(日本物理学会第79回年次大会 2024)
線虫の塩濃度記憶に依存した塩走性の神経回路メカニズム
(日本物理学会第79回年次大会 2024)

Education (2)：

1994 - 1999 Kyushu University Graduate School of Engineering epartment of Applied physics
1990 - 1994 Yamaguchi University Faculty of Science

Professional career (1)：

Doctor of Engineering (Kyushu University)

Work history (6)：

2024/10 - 現在 Muroran Institute of Technology Graduate School of Engineering College of Information and Systems Professor
2016/04 - 2024/09 Okayama University Research Institute for Interdisciplinary Science Associate professor
2013/04 - 2016/03 Okayama University Graduate School of Natural Science and Technology Associate professor
2007/04 - 2013/03 Toyohashi University of Technology Assistant professor
2002/04 - 2007/03 Toyohashi University of Technology Research Associate

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Committee career (11)：

2021/11 - 2021/12 分子シミュレーション学会第35回分子シミュレーション討論会実行委員
2018/09 - 2018/09 日本生物物理学会第56回日本生物物理学会実行委員
2017/09 - 2017/09 第29回液体の化学夏の学校講師
2015/11 - 2015/11 日本化学会中国四国支部大会実行委員
2014/09 - 2014/09 第26回液体の化学夏の学校の世話人(岡山閑谷学校開催)

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Awards (3)：

2024/10 - 両備檉(てい)園記念財団両備檉(てい)園記念財団生物学研究奨励賞
2023/07 - Okayama Foundation for Science and Technology
2022/03 - 岡山大学理学部岡山大学理学部教育貢献賞

Association Membership(s) (5)：

THE MOLECULAR SIMULATION SOCIETY OF JAPAN , THE BIOPHYSICAL SOCIETY OF JAPAN , JAPAN SOCIETY FOR MOLECULAR SCIENCE , 日本物理学会 , 日本化学会

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