Research field (3):
Theoretical studies related to particle-, nuclear-, cosmic ray and astro-physics
, Systems genomics
, Mathematical informatics
Research theme for competitive and other funds (1):
2015 - 2017 Establishment of skin inflammation drug to accumulate high-functional regulatory T cells by single-cell gene expression analysis
Papers (44):
Zichang Xu, Hendra S Ismanto, Dianita S Saputri, Soichiro Haruna, Guanqun Sun, Jan Wilamowski, Shunsuke Teraguchi, Ayan Sengupta, Songling Li, Daron M Standley. Robust detection of infectious disease, autoimmunity, and cancer from the paratope networks of adaptive immune receptors. Briefings in bioinformatics. 2024. 25. 5
Mara Llamas-Covarrubias, Atsushi Tanaka, Martin Loza, Diego Diez, Zichang Xu, Ee Lyn Lim, Shunsuke Teraguchi, Shimon Sakaguchi, Daron Standley. Th17 cells with a pathogenic signature in joints of ZAP-70 mutant arthritic mice harbor unique TCR repertoires that share features with WT Tregs. bioRxiv. 2024
Zichang Xu, Ana Davila, Jan Wilamowski, Shunsuke Teraguchi, Daron M Standley. Improved Antibody-Specific Epitope Prediction Using AlphaFold and AbAdapt. Chembiochem : a European journal of chemical biology. 2022. 23. 18. e202200303
Jan Wilamowski, Zichang Xu, Hendra S Ismanto, Songling Li, Shunsuke Teraguchi, Mara Anais Llamas- Covarrubias, Xiuyuan Lu, Sho Yamasaki, Daron Standley. InterClone: Store, Search and Cluster Adaptive Immune Receptor Repertoires. bioRxiv. 2022
Ana Davila, Zichang Xu, Songling Li, John Rozewicki, Jan Wilamowski, Sergei Kotelnikov, Dima Kozakov, Shunsuke Teraguchi, Daron M Standley, Michael Gromiha. AbAdapt: An adaptive approach to predicting antibody-antigen complex structures from sequence. Bioinformatics Advances. 2022. 2. 1. vbac015