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J-GLOBAL ID:200901080743630884   Update date: Jan. 27, 2025

Oda Masayuki

オダ マサユキ | Oda Masayuki
Clips
Affiliation and department:
Job title: Professor
Homepage URL  (2): https://kpu-biophyschem.com/https://kpu-biophyschem.com/english/
Research field  (3): Bio-, chemical, and soft-matter physics ,  Biophysics ,  Structural biochemistry
Research keywords  (7): biothermodynamics ,  signal transduction ,  antibody ,  enzyme ,  structure function relationship ,  protein ,  biomolecular Interaction
Research theme for competitive and other funds  (16):
  • 2022 - 2025 静的局所環境の学習によるタンパク質動的構造情報の抽出
  • 2021 - 2024 クチナーゼCut190のCa2+結合に伴う動的構造変化とPET分解分子機構の解明
  • 2020 - 2023 耐熱性放線菌由来PET分解酵素による廃棄PETのケミカルリサイクルの実用化
  • 2020 - 2023 Complex structure and affinity prediction among cancer vaccine peptides and immune related proteins
  • 2020 - 2022 クラゲコラーゲンの3Dバイオインク利用
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Papers (151):
  • Mutsumi Yoshida, Masayuki Oda. Affinity Maturation for Antibody Engineering: The Critical Role of Residues on CDR Loops of Antibodies in Antigen Binding. Molecules. 2025
  • Keiko Momma, Takeyuki Shimizu, Takahiro Hayashi, Yuki Hirakawa, Masataka Kuroda, Masayuki Oda. Monoclonal antibodies against jellyfish collagen. Journal of Biomaterials Applications. 2024
  • Nobutaka Numoto, Fumiya Kondo, Gert-Jan Bekker, Zengwei Liao, Mitsuaki Yamashita, Akira Iida, Nobutoshi Ito, Narutoshi Kamiya, Masayuki Oda. Structural dynamics of the Ca2+-regulated cutinase towards structure-based improvement of PET degradation activity. International Journal of Biological Macromolecules. 2024. 281. 136597-136597
  • Masataka Kuroda, Yuuya Kasahara, Masako Hirose, Harumi Yamaguma, Masayuki Oda, Chioko Nagao, Kenji Mizuguchi. Construction of a Tm-value prediction model and molecular dynamics study of AmNA-containing gapmer antisense oligonucleotide. Molecular Therapy - Nucleic Acids. 2024. 35. 3. 102272-102272
  • Mutsumi Yoshida, Yuya Hanazono, Nobutaka Numoto, Satoshi Nagao, Saaya Yabuno, Yumi Kitagawa, Hiroshi Sekiguchi, Nobutoshi Ito, Takachika Azuma, Masayuki Oda. Affinity-matured antibody with a disulfide bond in H-CDR3 loop. Archives of Biochemistry and Biophysics. 2024. 758. 110068-110068
more...
MISC (2):
Books (7):
  • 熱量測定・熱分析ハンドブック
    丸善出版 2020 ISBN:9784621305072
  • 食品ハイドロコロイドの開発と応用II
    シーエムシー出版 2015
  • 熱量測定・熱分析ハンドブック
    丸善 2010
  • ファルマシア
    2008
  • 等温滴定熱測定
    蛋白質科学プロトコール 2008
more...
Lectures and oral presentations  (44):
  • エンド-1,3-β-グルカナーゼ触媒ドメインの機能構造解析
    (日本農芸化学会大会講演要旨集(Web) 2017)
  • Generation of single-chain Fv antibody against (4-hydroxy-3-nitrophenyl)acetyl and analysis of its structural dynamics
    (PROTEIN SCIENCE 2015)
  • Structural and thermodynamic analysis of co-stimulation receptor CD28 phosphopeptide interactions with Grb2, Gads, and PI3-kinese SH2 domains
    (PROTEIN SCIENCE 2015)
  • 温度変化実験により明らかとなったc-Myb DNA結合ドメイン構造揺らぎの特性
    (日本蛋白質科学会年会プログラム・要旨集 2014)
  • 1P027 Insight into the antigen binding motion of germline and affinity-matured antibodies(Protein: Structure & Function,Poster,The 52th Annual Meeting of the Biophysical Society of Japan(BSJ2014))
    (Seibutsu Butsuri 2014)
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Education (2):
  • 1989 - 1991 Kyoto University Graduate School of Science
  • 1985 - 1989 Kyoto University Faculty of Science
Professional career (1):
  • Ph D
Work history (11):
  • 2018/04 - 現在 Kyoto Prefectural University Graduate School of Life and Environmental Sciences Professor
  • 2020/04 - 2021/03 山陽小野田市立山口東京理科大学 非常勤講師
  • 2019/04 - 2020/03 京都工芸繊維大学 非常勤講師
  • 2008/04 - 2018/03 Kyoto Prefectural University Graduate School of Life and Environmental Sciences Associate Professor
  • 2015/04 - 2016/03 名古屋工業大学 非常勤講師
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Committee career (9):
  • 2020/09 - 現在 日本生化学会 評議員
  • 2018/03 - 現在 Biomolecular Interaction Research Association (BIRA) president
  • 2020/10 - 2022/09 日本熱測定学会 委員
  • 2007 - 2021 日本生物物理学会 分野別編集委員
  • 2018/10 - 2019/09 日本熱測定学会 編集委員長、編集幹事
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Awards (2):
  • 2022 - Biophysics and Physicobiology Editors' Choice Award
  • 2006 - The Japan Society of Thermal Analysis and Calorimetry Encourage Award
Association Membership(s) (4):
バイオインタラクション研究会 ,  The Japan Society of Calorimetry and Thermal Analysis ,  The Biophysical Society of Japan ,  The Japanese Biochemical Society
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