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J-GLOBAL ID:200901083788745339   Update date: Feb. 17, 2025

BONO HIDEMASA

ボウノウ ヒデマサ | BONO HIDEMASA
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Affiliation and department:
Job title: Professor
Homepage URL  (1): https://bonohu.hiroshima-u.ac.jp/
Research field  (10): Metabolism and endocrinology ,  Biological, health, and medical informatics ,  Database science ,  Applied biofunctional and bioprocess engineering ,  Plant genetics and breeding ,  Tumor biology ,  Molecular biology ,  Systems genomics ,  Entomology ,  Genomics
Research keywords  (21): BioDX ,  public database ,  transcriptome analysis ,  ゲノム編集 ,  メタ解析 ,  Open Data ,  Oxygen Biology ,  Open Access ,  アノテーション ,  oxidative stress ,  Parkinson's disease ,  cancer ,  open source software ,  database ,  transcriptome ,  hypoxia ,  sequence analysis ,  functional annotation ,  バイオインフォマティクス ,  ゲノム ,  遺伝子発現解析
Research theme for competitive and other funds  (22):
  • 2024 - 2027 ハダカデバネズミの「健康長寿」システムを構成する分子基盤の解明
  • 2022 - 2027 新規脳内小タンパク質NPGLによる生活習慣病発症防止メカニズムの解明
  • 2021 - 2023 Development of data analysis platform technology for data-driven genomic breeding
  • 2020 - 2023 Elucidation of the molecular basis of anesthesia-induced alteration of immune response through regulation of oxygen homeostasis
  • 2021 - 2023 Investigation of the cancer-resistance mechanisms in the longest-lived rodent, the naked mole-rat.
Show all
Papers (157):
  • Miho Nakano, Takuma Sakamoto, Yoshikazu Kitano, Hidemasa Bono, Hiroko Tabunoki. CYP6B Subtype Expression Fluctuates in the Great Mormon, Papilio memnon, with Changes in the Components of the Host Plants. Insects. 2025. 16. 2. 159
  • Kazuki Nakamae, Takayuki Suzuki, Sora Yonezawa, Kentaro Yamamoto, Taro Kakuzaki, Hiromasa Ono, Yuki Naito, Hidemasa Bono. Risk Prediction of RNA Off-Targets of CRISPR Base Editors in Tissue-Specific Transcriptomes Using Language Models. bioRxiv. 2025. 2025.01.19.633823
  • Ryo Mameda, Hidemasa Bono. Data-driven workflow for comprehensive gene expression analysis in complex microbiomes. bioRxiv. 2025. 2025.01.17.632662
  • Kakeru Yokoi, Masatsugu Hatakeyama, Seigo Kuwasaki, Taro Maeda, Mikio Yoshiyama, Mari Horigane-Ogihara, Shigeru Matsuyama, Akiya Jouraku, Hidemasa Bono, Kimyoshi Kimura. Comprehensive expression data for two honey bee species, Apis mellifera and Apis cerana japonica. bioRxiv. 2024. 2024.12.11.627317
  • Takayuki Suzuki, Hidemasa Bono. Pipeline to explore information on genome editing using large language models and genome editing meta-database. bioRxiv. 2024. 2024.10.16.617154
more...
MISC (64):
  • 奥原 啓輔, 横井 翔, 中村 保一, 坊農 秀雅. バイオDX産学共創拠点におけるデータベース基盤技術開発. トーゴーの日2021. 2021. 1
  • 藤岡周助, 藤岡周助, 岡香織, 河村佳見, 河村佳見, 菰原義弘, 中條岳志, 山村祐紀, 大岩祐基, 須藤洋一, et al. Cancer resistance in naked mole-rats via a dampened inflammatory response. 日本薬学会年会要旨集(Web). 2021. 141st. 29V08-am11S
  • Hiromasa Ono, Hidemasa Bono. RefEx: Dataset for Reference Gene Expression. Practical Guide to Life Science Databases. 2021. in press-133
  • 坊農秀雅. 注目を集める生命科学データ解析. 電脳会議. 2019. 193. 7-7
  • 小野浩雅, 坊農秀雅. 遺伝子発現解析の基準となるデータを快適に検索できるウェブツール「RefEx」. 実験医学. 2018. 36. 6. 999-1003
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Books (35):
  • 論文に出る遺伝子 デルジーン300
    羊土社 2024 ISBN:9784758122771
  • Dr. Bono's Lectures on Genome Sequencing and Data Analysis in the 2020s
    2024 ISBN:4815731209
  • 生命科学研究のためのデジタルツール入門 第2版
    メディカル・サイエンス・インターナショナル 2024 ISBN:4815731063
  • Dr. Bono's Hands-On Guide to Biological Data Analysis
    2023 ISBN:9784815730888
  • 改訂版RNA-Seqデータ解析 WETラボのための超鉄板レシピ
    羊土社 2023 ISBN:9784758122672
more...
Lectures and oral presentations  (186):
  • ナガサキアゲハの代謝による生物活性物質の生成
    (第69回日本応用動物昆虫学会大会 2025)
  • ピレスロイド感受性および抵抗性のトコジラミにおけるPacBio HiFiリードによるゲノムシーケンス解析
    (第69回日本応用動物昆虫学会大会 2025)
  • 昆虫のゲノムデータ解析を始めよう
    (第69回日本応用動物昆虫学会大会 2025)
  • 塩および干ばつストレス下におけるイネの公共 RNA-Seq データの統合解析によるイネの新規ストレス応答遺伝子の同定
    (第66回日本植物生理学会年会 2025)
  • 野生品種と栽培品種の公共データによる栽培化に伴う発現変動遺伝子のメタ解析
    (第66回日本植物生理学会年会 2025)
more...
Works (8):
  • AOE (All of gene expression)
    Hidemasa Bono 2014 - 2024
  • CRISPRdirect
    Yuki Naito, Kimihiro Hino, Hidemasa Bono, Kumiko Ui-Tei 2014 -
  • RefEx (Reference Expression dataset)
    Hiromasa Ono, Hidemasa Bono 2011 -
  • GGRNA
    Yuki Naito, Hidemasa Bono 2011 -
  • DBCLS SRA
    Takeru Nakazato, Tazro Ohta, Hidemasa Bono 2011 -
more...
Education (4):
  • 1997 - 2000 Kyoto University
  • 1995 - 1997 Kyoto University
  • 1993 - 1995 The University of Tokyo College of Arts and Sciences Department of Basic Science
  • 1991 - 1993 The University of Tokyo
Professional career (1):
  • Doctor of Science (Kyoto University)
Work history (9):
  • 2023/10 - 現在 Hiroshima University Graduate school of Integrated Sciences for Life Professor
  • 2020/04 - 現在 Research Organization of Information and Systems Joint Support-Center for Data Science Research Database Center for Life Science
  • 2020/04 - 2023/09 Hiroshima University Graduate school of Integrated Sciences for Life Project Professor
  • 2007/07 - 2020/03 Database Center for Life Science, Research Organization of Information and Systems Project Associate Professor
  • 2007/04 - 2007/06 Saitama Medical University Research Center for Genomic Medicine
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Committee career (13):
  • 2024/08 - 2026/06 The Japanese Society for Genome Editing Members of the Public Relations Committee
  • 2024/06 - 2025/07 IJMS Guest Editor
  • 2020/04 - 2025/03 Research Organization of Information and Systems Visiting Professor
  • 2023/03 - 2024/01 IJMS Guest Editor
  • 2020/04 - 2023/09 PtBio Inc. Scientific Advisor
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Association Membership(s) (3):
The Japanese Society for Genome Editing ,  THE JAPANESE CANCER ASSOCIATION ,  THE MOLECULAR BIOLOGY SOCIETY OF JAPAN
※ Researcher’s information displayed in J-GLOBAL is based on the information registered in researchmap. For details, see here.

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