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Rchr

J-GLOBAL ID：201001025273786718 Update date: Apr. 03, 2025

Yasukazu Nakamura

ナカムラヤスカズ | Yasukazu Nakamura

Affiliation and department：
Job title： Professor
Other affiliations (2)：

The Graduate University for Advanced Studies Genetics Program, Graduate Institute for Advanced Studies Professor
Kazusa DNA Research Institute Facility for Genome Informatics Visiting Scientist

Homepage URL (1)： http://ynlab.info/yn/

Research field (3)： Biological, health, and medical informatics , Veterinary medicine , Genomics

Research theme for competitive and other funds (20)：

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Papers (194)：

Kazumichi Fujiwara, Atsushi Toyoda, Bhim B Biswa, Takushi Kishida, Momi Tsuruta, Yasukazu Nakamura, Noriko Kimura, Shoko Kawamoto, Yutaka Sato, Toshio Katsuki, et al. A Near Complete Genome Assembly of the Oshima Cherry Cerasus speciosa. Scientific data. 2025. 12. 1. 162-162
Mohamed Elmanzalawi, Takatomo Fujisawa, Hiroshi Mori, Yasukazu Nakamura, Yasuhiro Tanizawa. DFAST_QC: quality assessment and taxonomic identification tool for prokaryotic Genomes. BMC bioinformatics. 2025. 26. 1. 3-3
Ken-Ichi Kurotani, Hideki Hirakawa, Kenta Shirasawa, Koya Tagiri, Moe Mori, Abedelaziz Ramadan, Yasunori Ichihashi, Takamasa Suzuki, Yasuhiro Tanizawa, Jiyuan An, et al. Establishing a comprehensive web-based analysis platform for Nicotiana benthamiana genome and transcriptome. The Plant journal : for cell and molecular biology. 2025. 121. 1. e17178
Hidehiro Toh, Wan Kin Au Yeung, Motoko Unoki, Yuki Matsumoto, Yuka Miki, Yumiko Matsumura, Yoshihiro Baba, Takashi Sado, Yasukazu Nakamura, Miho Matsuda, et al. A deletion at the X-linked ARHGAP36 gene locus is associated with the orange coloration of tortoiseshell and calico cats. bioRxiv (preprint). 2024
Ilene Karsch-Mizrachi, Masanori Arita, Tony Burdett, Guy Cochrane, Yasukazu Nakamura, Kim D Pruitt, Valerie A Schneider, On Behalf Of The International Nucleotide Sequence Database Collaboration. The international nucleotide sequence database collaboration (INSDC): enhancing global participation. Nucleic acids research. 2024

MISC (281)：

黒谷賢一, 平川英樹, 白澤健太, 田桐昂也, 森萌恵, 市橋泰範, 鈴木孝征, 谷澤靖洋, 中村保一, 磯部祥子, et al. Nicotiana benthamianaゲノムとトランスクリプトームのデータベース構築. 日本植物学会大会研究発表記録(CD-ROM). 2024. 88th
松田美穂, 歐陽允健, 鵜木元香, 松本悠貴, 三木佑果, 松村友美子, 中村保一, 藤英博, 佐々木裕之. 三毛猫の毛色をつかさどる遺伝子の探索~60年間の謎に挑む~(2). 日本分子生物学会年会プログラム・要旨集(Web). 2024. 47th
坂本美佳, 中村保一. 獣医療に役立つ高品質ゲノム配列と遺伝子情報. 日本分子生物学会年会プログラム・要旨集(Web). 2024. 47th
藤英博, 歐陽允健, 鵜木元香, 松本悠貴, 三木佑果, 松村友美子, 中村保一, 松田美穂, 佐々木裕之. 三毛猫の毛色をつかさどる遺伝子の探索~60年間の謎に挑む~(1). 日本分子生物学会年会プログラム・要旨集(Web). 2024. 47th
西山典秀, 望月孝子, 坂本美佳, 谷澤靖洋, 津田勝利, 佐藤(志水)佐江, 吉川貴徳, 中村保一, 豊田敦, 佐藤豊. Genome analysis of the highly salt-tolerant wild rice Oryza coarctata. 育種学研究. 2024. 26

Lectures and oral presentations (307)：

Improved genome reference of American shorthair, and the orange gene locus in cats
(Plant and Animal Genome Conference (PAG 23) 2025)
DDBJ and the INSDC: Shaping the Future of Global Genomic Data Infrastructure
(11th International Conference on Biomedical and Bioinformatics Engineering (ICBBE 2024) 2024)
Development of high-precision reference genomes for cats and dogs for the purpose of companion animal genomic medicine
(Kazusa DNA Research Institute, Washoku BioGenome Consortium, PacBio Japan, Tomy Digital Biology 2024)
DDBJ updates in 2024
(The 9th Big Data Forum for Life Health Sciences and the 21st Asian Bioinformatics Consortium Symposium 2024)
Comprehensive Annotation of Neuropeptides of <i>Gryllus bimaculatus</i>
(International Congress of Entomology 2024)

Education (3)：

1994 - 1996 The Graduate University for Advanced Studies Faculty of Lifescience Department of Genetics
1989 - 1991 Kyoto University Graduate School of Agriculture Department of Agricultual Technology
1985 - 1989 Shinshu University Faculty of Agriculture Department of Agricultural Technology

Professional career (1)：

Work history (7)：

2009/01 - 現在 Kazusa DNA Research Institute Visiting Scientist
2009/01 - 現在 The Graduate University for Advanced Studies School of Life Science Department of Genetics Professor
2009/01 - 現在 National Institute of Genetics Genome Informatics Laboratory Professor
2006/04 - 2008/12 Kazusa DNA Research Institute Laboratory of Plant Genome Informatics Head of Laboratory
2003/04 - 2008/12 The University of Tokyo Graduate School of Frontier Sciences Department of Computational Biology Visiting Associate Professor

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Committee career (7)：

2024/05 - 現在 Multiscale and Interdisciplinary Approaches to Investigate Mechanisms of Resilience and Diversification across Wide Ranges of Spatiotemporal Metrics, PRESTO, JST Research Area Advisor
2023/05 - 現在 The Genome Taxonomy Database (GTDB) Scientific Advisory Board member
2021/12 - 現在 NARO Core Technology Research Headquarters External Review Committee Member
2020/01 - 現在 China National Genomics Data Center's Scientific Advisory Board Scientific Advisor
2019/04 - 現在 RIKEN BioResource Research Center Resource Committee of Information

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Association Membership(s) (4)：

Japanese Society for Bioinformatics , Society of Genome Microbiology, Japan , The Molecular Biology Society of Japan , 植物インフォマティクス研究会

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