Makino Takashi

マキノタカシ | Makino Takashi

Affiliation and department：
Job title： Associate Professor
Homepage URL (2)： https://www.lifesci.tohoku.ac.jp/evolgenomics , https://www.lifesci.tohoku.ac.jp/evolgenomics/home-en/

Research field (1)： Evolutionary biology

Research keywords (4)：遺伝子発現制御の進化 , genome duplication , comparative genomics , gene duplication

Research theme for competitive and other funds (23)：

2023 - 2029 ダイズ遺伝子の精密発現調節技術の開発
2024 - 2027 絶滅に瀕する島嶼陸産貝類の保全に向けた貝食性外来種防除技術の開発
2024 - 2027 新たな限界発現系gTOW2.0で解き明かす発現制約メカニズムの全体像
2023 - 2026 Single-cell analysis to understand gene regulatory system in crops
2023 - 2026 刺胞動物エダアシクラゲにおける枝分かれ形成機構の解析

2022 - 2025 遺伝子近傍保存モジュールによる発現抑制機構の解明と分子育種への利用

2021 - 2025 Characterizing the JmjC Domain-Encoding demethylase HRJD in highly regenerative arthropods for evolutionary insights into regenerative processes

2022 - 2024 連続するアミノ酸(PolyX)が生み出す細胞毒性のメカニズム

2019 - 2023 Evolutionary mechnisms for thermal niche shift in Anolis lizards

2016 - 2018 Traits changing associated with the evolution of body size

2015 - 2018 Evolutionary mechanisms for individual variation of female choice in the guppy

2015 - 2018 Genetic basis for key traits of stickleback freshwater coloniztion

2014 - 2017 Analysis of mechanisms to avoid stoichiometry imbalance

2014 - 2016 Evolution of gene duplication and adaptive capacity; experimental evolution of Saccharomyces cerevisiae

2013 - 2016 Adaptation to new climate environments:using Cuban Anoles lizard in a semi-desert habitat

2012 - 2016 Development of forest paleogenetic approaches using ancient pollen grains found in an ice core from mountain glacier

2011 - 2016 Molecular mechanisms of genomic incompatibility and reproductive isolation in sticklebacks

2012 - 2015 Evolutionary factors affecting species range shift: using butterfly species

2012 - 2014 The analysis of copy number variations in the field populations for disease ecology

2011 - 2014 Analysis of the network constructed by dosage balanced genes in yeast

2011 - 2013 アノールトカゲにおける複合適応形質としての温度適応分化の遺伝的基盤の解明

2010 - 2012 Determining adaptive traits and the candidate genes in Cuban Anolis lizards

2010 - 2011 Deleterious effect to human genes by meiotic recombination

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Papers (67)：

Daiki Nakayama, Takashi Makino. Convergent accelerated evolution of mammal-specific conserved non-coding elements in hibernators. Scientific Reports. 2024
Shankar C R R Chereddy, Takashi Makino. Conserved Genes in Highly Regenerative Metazoans Are Associated with Planarian Regeneration. Genome biology and evolution. 2024. 16. 5
Fuku Sakamoto, Shunsuke Kanamori, Luis M. Díaz, Antonio Cádiz, Yuu Ishii, Katsushi Yamaguchi, Shuji Shigenobu, Takuro Nakayama, Takashi Makino, Masakado Kawata. Detection of evolutionary conserved and accelerated genomic regions related to adaptation to thermal niches in Anolis lizards. Ecology and Evolution. 2024. 14. 3
Hidehiro Kudoh, Sayuri Yonei-Tamura, Gembu Abe, Junichi Iwakiri, Masahiro Uesaka, Takashi Makino, Koji Tamura. Genomic screening of fish-specific genes in gnathostomes and their functions in fin development. Development, Growth & Differentiation. 2024
Kaori Tsunenari, Takuro Ito, Masatsugu Yokota, Mayu Shibabayashi, Chiharu Endo, Kuo-Fang Chung, Yoshihisa Suyama, Ayumi Matsuo, Atsushi Abe, Akiyo Naiki, et al. Double migration of the endangered Tricyrtis formosana (Liliaceae) in Japan. Scientific reports. 2024. 14. 1. 957-957

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MISC (11)：

関谷洸, 宮腰拓, 米井小百合, 阿部玄武, 田中良和, 牧野能士, 田村宏治. Comparative genomics and developmental biological approaches on morphological evolution in vertebrates. 日本分子生物学会年会プログラム・要旨集(Web). 2019. 42nd
関谷洸, 宮腰拓, 米井小百合, 阿部玄武, 田中良和, 牧野能士, 田村宏治. ゲノム比較と発生学的手法を用いたアプローチから脊椎動物の形態進化を考察する. 日本分子生物学会年会プログラム・要旨集(Web). 2019. 42nd
日下部誠, 石川麻乃, Mark Ravinet, 吉田恒太, 牧野能士, 北野潤. イトヨの海水適応に必須な遺伝子を遺伝学的視点から探る. 月刊海洋. 2017. 49. 4. 187-195
玉手智史, 森英章, COMPOSANO Brian J., LKRYSKO Kenneth, 舟山亮, 中山啓子, 牧野能士, 河田雅圭. 小笠原諸島に侵入したグリーンアノールの進化的変化の検出と集団ゲノム解析. 日本生態学会大会講演要旨(Web). 2016. 63rd
玉手智史, 森英章, KRYSKO Kenneth L., 牧野能士, 河田雅圭. 小笠原諸島に侵入したグリーンアノールの進化的変化の検出と集団ゲノミクス解析. 日本進化学会大会プログラム・講演要旨集(Web). 2015. 17th

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Books (2)：

遺伝学の百科事典 : 継承と多様性の源 = Encyclopedia of genetics : origin of inheritance and diversity
丸善出版 2022 ISBN:9784621306604
ヒトゲノム事典
一色出版 2021 ISBN:9784910389127

Lectures and oral presentations (5)：

Evolutionary approaches to the estimation of deleterious CNVs causing diseases
(静岡がんセンター研究所リサーチカンファレンス 2022)
絶滅危惧種の保全優先度評価に向けたゲノム科学的アプローチ
(水産育種研究会・定例シンポジウム 2022)
希少植物の絶滅危険度はゲノムの情報から読み取ることができる
(日本生態学会企画集会 2022)
RNA-seq解析による希少植物のゲノム診断
(種生物学会 2021)
低温環境に適応した侵略種アメリカザリガニのパラロガスゲノミクス
(日本進化学会沖縄大会シンポジウム)

Professional career (1)：

Doctor of Science (The Graduate University for Advanced Studies)

Committee career (1)：

2022/01 - 現在日本進化学会代議員

Association Membership(s) (3)：

THE GENETICS SOCIETY OF JAPAN , THE ECOLOGICAL SOCIETY OF JAPAN , SOCIETY OF EVOLUTIONARY STUDIES, JAPAN

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