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J-GLOBAL ID:201201009024944388   Update date: Feb. 18, 2025

Tasaki Sohei

タサキ ソウヘイ | Tasaki Sohei
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Affiliation and department:
Job title: Associate Professor
Other affiliations (2):
  • Hokkaido University  Graduate School of Science   Associate Professor
  • Hokkaido University  Research Center of Mathematics for Social Creativity, Research Institute for Electronic Science   Associate Professor
Homepage URL  (1): https://sohei-tasaki.github.io
Research field  (6): Bacteriology ,  Developmental biology ,  Biophysics ,  Bio-, chemical, and soft-matter physics ,  Applied mathematics and statistics ,  Basic mathematics
Research keywords  (30): Model inference ,  Network inference ,  Sparse modeling ,  Data assimilation ,  Cluster analysis ,  Topological data analysis ,  Quantitative data analysis ,  Numerical analysis ,  Bifurcation theory ,  Variational method ,  Differential equations ,  Lipid bilayers ,  Shape memory alloys ,  Viscoelasticity ,  Phase separation ,  Phase transition ,  Non-equilibrium thermodynamics ,  Collective motion ,  Morphogenesis ,  Reprogramming ,  Epigenomes ,  Gene regulatory networks ,  Cellular diversity ,  Self-organization ,  Biofilms ,  Colony patterns ,  Bacillus subtilis ,  Pattern Formation ,  Data Analysis ,  Mathematical models
Research theme for competitive and other funds  (7):
  • 2023 - 2026 Construction and analysis of a hybrid mathematical model describing the dynamics of bacterial cellular society
  • 2019 - 2023 Creation of multilevel model for predicting self-organization of bacterial population
  • 2017 - 2022 Integrated analysis and regulation of cellular diversity for disease treatment
  • 2013 - 2018 Prediction and control of biological self-organization dynamics
  • 2014 - 2016 数理解析による神経パターン形成機構の解明
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Papers (23):
  • Fumitake Kato, Hiroshi Koibuchi, Elie Bretin, Camille Carvalho, Roland Denis, Simon Masnou, Madoka Nakayama, Sohei Tasaki, Tetsuya Uchimoto. Turing patterns on polymerized membranes: a coarse-grained lattice modelling with internal degree of freedom for polymer direction. Soft Matter. 2025
  • Gildas Diguet, Madoka Nakayama, Sohei Tasaki, Fumitake Kato, Hiroshi Koibuchi, Tetsuya Uchimoto. Numerical study of anisotropic diffusion in Turing patterns based on Finsler geometry modeling. Physical Review E. 2024. 109. 1
  • Toshiaki Yachimura, Hanbo Wang, Yusuke Imoto, Momoko Yoshida, Sohei Tasaki, Yoji Kojima, Yukihiro Yabuta, Mitinori Saitou, Yasuaki Hiraoka. scEGOT: Single-cell trajectory inference framework based on entropic Gaussian mixture optimal transport. 2023
  • Hiroki Nagai, Luis Augusto Eijy Nagai, Sohei Tasaki, Ryuichiro Nakato, Daiki Umetsu, Erina Kuranaga, Masayuki Miura, Yuichiro Nakajima. Nutrient-driven dedifferentiation of enteroendocrine cells promotes adaptive intestinal growth in Drosophila. Developmental Cell. 2023. 58. 18. 1-18
  • Yukiko Nakaya, Mitsusuke Tarama, Sohei Tasaki, Ayako Isomura, Tatsuo Shibata. Migrating mesoderm cells self-organize into a dynamic meshwork structure during chick gastrulation. 2022
more...
Books (2):
  • 数理科学 2021年9月号 No. 699 数理モデリングと生命科学
    サイエンス社 2021
  • The Impact of Applications on Mathematics
    Springer Nature 2014
Lectures and oral presentations  (113):
  • Mathematical analysis of motility response to resources in bacterial cell populations
    (ReaDiNet 2024: Recent Progresses in the theory of reaction and diffusion equations 2024)
  • Multilevel concepts in bacterial cell populations
    (7th Joint Conference of A3 Foresight Program on Computational and Applied Mathematics 2024)
  • Multilevel mathematical modeling methods for morphogenesis of bacterial cell populations
    (KSMB-SMB2024SEOUL 2024)
  • Multilevel mathematical modeling methods for morphogenesis of bacterial cell populations
    (Turing Symposium on Morphogenesis, 2024 - a Panorama in Turing's Sight - 2024)
  • 最適輸送理論を用いた細胞分化の軌跡推定について
    (2023年度応用数学合同研究集会 2023)
more...
Professional career (2):
  • Ph.D. in Science (Osaka University)
  • M.Eng. (Osaka University)
Work history (9):
  • 2021/07 - 現在 Hokkaido University Research Center of Mathematics for Social Creativity, Research Institute for Electronic Science Associate Professor
  • 2021/04 - 現在 Hokkaido University Graduate School of Science
  • 2021/04 - 現在 Hokkaido University Faculty of Science Assistant Professor
  • 2019/10 - 2021/03 RIKEN Center for Biosystems Dynamics Research (BDR) Research Scientist
  • 2019/10 - 2021/03 Kyoto University Institute for the Advanced Study of Human Biology (ASHBi), Kyoto University Institute for Advanced Study (KUIAS), Kyoto University Assistant Professor
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Committee career (3):
  • 2023/11 - 現在 The Japan Society for Industrial and Applied Mathematics 学会誌「応用数理」主査(論文部門・チュートリアル部門・特集部門)
  • 2023/04 - 現在 National Institute of Science and Technology Policy, MEXT 専門調査員
  • 2022/04 - 2023/10 The Japan Society for Industrial and Applied Mathematics 学会誌「応用数理」編集委員(論文部門・チュートリアル部門)
Association Membership(s) (2):
THE MATHEMATICAL SOCIETY OF JAPAN ,  THE JAPAN SOCIETY FOR INDUSTRIAL AND APPLIED MATHEMATICS
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