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J-GLOBAL ID：201601013589839798 Update date: Apr. 16, 2025

Imoto Yusuke

イモトユウスケ | Imoto Yusuke

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Affiliation and department：
Job title： Associate Professor
Homepage URL (2)： https://ashbi.kyoto-u.ac.jp/y-imoto/ , https://ashbi.kyoto-u.ac.jp/y-imoto/en/

Research field (3)： Computational science , Applied mathematics and statistics , Basic mathematics

Research keywords (7)： High-dimensional statistics , Statistical Causal Discovery , Topological Data Analysis , Hyper-Dual Numbers , Applied mathematics , Computational Fluid Dynamics , Numerical Analysis

Research theme for competitive and other funds (12)：

2024 - 2030 Innovation in Interdisciplinary Mathematical Research via Single-Cell Data Science
2023 - 2027 Artificial generation of upstream maritime heavy rains to govern intense-rain-induced disasters over land (AMAGOI)
2024 - 2025 1細胞ダイナミクスの多層分解による細胞地図の構築
2020 - 2024 Multi-resolution structural analysis system for cell differentiation
2022 - 2023 気象制御のための制御容易性・被害低減効果の定量化

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Papers (32)：

Pascal Oettli, Keita Tokuda, Yusuke Imoto, Shunji Kotsuki. Meteorological Landscape of Tropical Cyclone. EGUsphere. 2025
Shusei Fujioka, Mayu Fujioka, Yusuke Imoto, Yasuyo Harada, Hiroyuki Yoshitomi, Masato Kubo, Yasuaki Hiraoka, Hideki Ueno. Single-cell multiomic analysis revealed the differentiation, localization, and heterogeneity of IL10+ Foxp3- follicular T cells in humans. International Immunology. 2025
May Nakajima-Koyama, Mio Kabata, Joonseong Lee, Yuko Sogabe, Satoko Sakurai, Akira Hirota, Mizuki Kimura, Tomonori Nakamura, Yusuke Imoto, Kohei Kometani, et al. The balance between IFN-γ and ERK/MAPK signaling activities ensures lifelong maintenance of intestinal stem cells. Cell Reports. 2025. 115286-115286
Toshiaki Yachimura, Hanbo Wang, Yusuke Imoto, Momoko Yoshida, Sohei Tasaki, Yoji Kojima, Yukihiro Yabuta, Mitinori Saitou, Yasuaki Hiraoka. scEGOT: single-cell trajectory inference framework based on entropic Gaussian mixture optimal transport. BMC Bioinformatics. 2024. 25. 1
Yusuke Imoto. Hyper-Dual Number-Based Numerical Differentiation -Theory and Application-. Bulletin of the Japan Society for Industrial and Applied Mathematics. 2024. 34. 4. 23-33

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MISC (8)：

松本久也, 井元佑介, 浅井光輝, 三目直登. Development of Bottom Boundary-Fitted Particle Methods Based on Coordinate Transformation. 計算工学講演会論文集(CD-ROM). 2021. 26
藤井孟大, 浅井光輝, 井元佑介. 選択型デュアル流速ISPH法を用いた固液混相流解析の精度検証. 土木学会年次学術講演会講演概要集(CD-ROM). 2020. 75th
藤井孟大, 浅井光輝, 井元佑介. A stabilized ISPH method with dual physical and transport velocity for fluid flow analysis including density variations. 計算工学講演会論文集(CD-ROM). 2020. 25
井元佑介, 浅井光輝. 非圧縮性Navier-Stokes方程式に対する粒子法における安定化項の考察. 日本応用数理学会年会講演予稿集(CD-ROM). 2019. 2019. 349-350
三目直登, TOMICZEK Tori, DONAHUE Aaron, 井元佑介, WESTERINK Joannes, 山田知典, 吉村忍. 2D-3D片方向連成波モデルによる津波再現水槽実験の並列解析. 日本機械学会計算力学講演会論文集(CD-ROM). 2017. 30th. ROMBUNNO.044

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Patents (1)：

データ処理方法、データ処理装置およびデータ処理プログラム

Books (5)：

数学セミナー 2024年12月号:ノイズを知り,呪いを祓う - 高次元統計解析に基づく1細胞データのノイズ削減法の開発
日本評論社 2024
数理科学2023年6月号高次元データの「かたち」を可視化する: トポロジカルデータ解析手法 Mapper の理論・応用
サイエンス社 2023
いまさら聞けない計算力学の定石
丸善出版 2020
RIMS共同研究 (公開型)「次世代の科学技術を支える数値解析学の基盤整備と応用展開」開催報告
JSIAM Online Magazine 2019
東北大学知のフォーラムの活動と今後の展開
JSIAM Online Magazine 2018

Lectures and oral presentations (34)：

RNA landscape in single cells
(Differential Equations for Data Science 2025 2025)
高次元粒子法とデータ解析
(2024年度応用数学合同研究集会 2024)
Comprehensive Noise Reduction of Single-Cell Data with RECODE
(1st Asia & Pacific Bioinformatics Joint Conference 2024)
Single-cell trajectory analysis with V-Mapper
(AATRN Applied Topology Seminar 2024)
シングルセルデータ前処理の共通基盤を目指して
(Single-cell Meets Data 2024)

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Education (3)：

2013 - 2016 Kyushu University Faculty of Mathematics, Doctoral course mathemacics & science course
2011 - 2013 Kyushu University Faculty of Mathematics, master's course
2007 - 2011 Kyushu University School of Science Department of Mathematics

Professional career (1)：

Doctor of Mathematics (Kyushu University)

Work history (5)：

2024/04 - 現在 Kyoto University FOREST Principal Investigator
2022/09 - 現在 Kyoto University Institute for the Advanced Study of Human Biology (ASHBi), Kyoto University Institute for Advanced Study (KUIAS) Associate Professor
2020/11 - 2024/03 Japan Science and Technology Agency PRESTO Researcher
2019/02 - 2022/08 Kyoto University Institute for the Advanced Study of Human Biology (ASHBi), Kyoto University Institute for Advanced Study (KUIAS) Assistant professor
2016/04 - 2019/01 Tohoku University Tohoku Forum for Creativity Assistant professor

Committee career (5)：

2021/04 - 現在 Japan Society for Industrial and Applied Mathematics (JSIAM) Committee, Research activity `Topological Data Analysis'
2019/07 - 現在 Japan Society for Industrial and Applied Mathematics (JSIAM) Committee, Research activity `Young Reseachers'
2019/04 - 現在 Japan Society for Industrial and Applied Mathematics (JSIAM) Committee, Research activity `Mathematical Aspects on Continuum Mechanics'
2020/04 - 2024/03 The Japan Society for Industrial and Applied Mathematics Secretary Editors in JSIAM Letters
2019/04 - 2022/03 Japan Society for Industrial and Applied Mathematics (JSIAM) Editorial committee of JSIAM flagship journal

Awards (8)：

2020/09 - JSIAM Paper Price
2019/03 - The Mathematical Society of Japan (MSJ) The 2018 MSJ Prize for Exellent Applied Mathematicians
2018/06 - the Japan society for industrial and applied mathematics (JSIAM) Presentation award on JSIAM Spring meeting 2018,
2016/03/25 - 九州大学九州大学学生表彰(研究)
2015/12 - 土木学会応用力学委員会応用力学シンポジウム講演賞

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Association Membership(s) (3)：

The Japan Society for Computational Engineering and Science , The Japan Society for Industrial and Applied Mathematics , The Mathematical Society of Japan

※ Researcher’s information displayed in J-GLOBAL is based on the information registered in researchmap. For details, see here.

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