libRCGA: a C library for real-coded genetic algorithms for rapid parameter estimation of kinetic models
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Papers (32):
Hiroyuki Kurata, Md. Harun-Or-Roshid, Sho Tsukiyama, Kazuhiro Maeda. PredIL13: Stacking a variety of machine and deep learning methods with ESM-2 language model for identifying IL13-inducing peptides. PLOS ONE. 2024. 19. 8. e0309078-e0309078
Hiroyuki Kurata, Md Harun-Or-Roshid, Md Mehedi Hasan, Sho Tsukiyama, Kazuhiro Maeda, Balachandran Manavalan. MLm5C: A high-precision human RNA 5-methylcytosine sites predictor based on a combination of hybrid machine learning models. Methods. 2024
Md. Harun-Or-Roshid, Kazuhiro Maeda, Le Thi Phan, Balachandran Manavalan, Hiroyuki Kurata. Stack-DHUpred: Advancing the accuracy of dihydrouridine modification sites detection via stacking approach. Computers in Biology and Medicine. 2024. 169. 107848-107848
Kazuhiro Maeda, Masashi Hirano, Taka Hayashi, Midori Iida, Hiroyuki Kurata, Hiroshi Ishibashi. Elucidating Key Characteristics of PFAS Binding to Human Peroxisome Proliferator-Activated Receptor Alpha: An Explainable Machine Learning Approach. Environmental Science & Technology. 2023. 58. 1. 488-497
Kazuhiro Maeda, Hiroyuki Kurata. Automatic Generation of SBML Kinetic Models from Natural Language Texts Using GPT. International Journal of Molecular Sciences. 2023. 24. 8. 7296-7296
前田和勲, Fred C. Boogerd, 倉田博之. RCGAToolbox: 動力学モデルのパラメーター推定 のための実数値遺伝的アルゴリズムソフトウェア. 研究報告バイオ情報学(BIO). 2022. 69. 20
MAEDA Kazuhiro. Kinetic parameter estimation problem: a case study of E. coli ammonium transport-assimilation network. IPSJ SIG Technical Report. 2019. 2019. 5. 1-1
2008 - 2011 Kyushu Institute of Technology Graduate School of Computer Science and Systems Engineering
2006 - 2008 Kyushu Institute of Technology
2003 - 2006 Kyushu Institute of Technology School of Computer Science and Systems Engineering
Professional career (1):
博士(情報工学) (九州工業大学)
Work history (8):
2024/04 - 現在 Kyushu Institute of Technology
2024/01 - 現在 Kyushu Institute of Technology Faculty of Computer Science and Systems Engineering Department of Bioscience and Bioinformatics Associate Professor
2020/11 - 2024/03 Japan Science and Technology Agency PREST
2019/12 - 2023/12 Kyushu Institute of Technology Faculty of Computer Science and Systems Engineering Department of Bioscience and Bioinformatics Assistant Professor
2015/03 - 2019/11 Kyushu Institute of Technology
2012/04 - 2015/02 Kyushu Institute of Technology
2011/04 - 2012/03 日本学術振興会 特別研究員 (PD)
2010/04 - 2011/03 日本学術振興会 特別研究員 (DC2)
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Committee career (2):
2023/04 - 現在 BIOMOD 運営委員
2019/09 - 現在 Bioinformatics subcommittee, The Society for Biotechnology, Japan Committee
Awards (6):
2021/07 - 九州工業大学 九州工業大学デジタルコンテンツコンテスト優秀賞
2021/07 - Kyushu Institute of Technology Kyutech Digital Contents Contest, Award of Excellence
2019/09 - IPSJ IPSJ Yamashita SIG Research Award
2018/09 - IPSJ Bio SIGBIO Excellent Presentation Award
2017/09 - IPSJ Bio SIGBIO Excellent Presentation Award
2010/03 - The Funai Foundation for Information Technology IPSJ Paper Funai Young Scientist Award
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Association Membership(s) (4):
INFORMATION PROCESSING SOCIETY OF JAPAN
, JAPANESE SOCIETY FOR BIOINFORMATICS
, THE MOLECULAR BIOLOGY SOCIETY OF JAPAN
, The Society for Biotechnology, Japan