Umemura Maiko

Research theme for competitive and other funds (7)：

2023 - 2025 進化過程を模倣した機能遺伝子クラスターの設計
2023 - 2025 Developmental design for natural product biosynthetic clusters using machine learning
2020 - 2023 Cyclization mechanism of fungal amphipathic ribosomal peptides
2017 - 2019 カビ新規RiPPsライブラリ構築と非天然環状ペプチド創製
2016 - 2019 Bioinformatics analyses to search for ribosomal peptide biosynthetic genes from filamentous fungi

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Papers (41)：

Shigenari Yamaguchi, Tomonori Fujioka, Akira Yoshimi, Toshitaka Kumagai, Maiko Umemura, Keietsu Abe, Masayuki Machida a, Kiyoshi Kawai. Discovery of a gene cluster for the biosynthesis of novel cyclic peptide compound, KK-1, in Curvularia clavata. Frontiers in Fungal Biology. 2023. 3
Maiko Umemura, Koichi Tamano. How to improve the production of peptidyl compounds in filamentous fungi. Frontiers in Fungal Biology. 2022. 3
Hiroki Takahashi, Maiko Umemura, Akihiro Ninomiya, Yoko Kusuya, Masaaki Shimizu, Syun-ichi Urayama, Akira Watanabe, Katsuhiko Kamei, Takashi Yaguchi, Daisuke Hagiwara. Interspecies Genomic Variation and Transcriptional Activeness of Secondary Metabolism-Related Genes in Aspergillus Section Fumigati. Frontiers in Fungal Biology. 2021. 2
Maiko Umemura, Kaoru Kuriiwa, Koichi Tamano, Yutaka Kawarabayasi. Ustiloxin biosynthetic machinery is not compatible between Aspergillus flavus and Ustilaginoidea virens. Fungal genetics and biology : FG & B. 2020. 143. 103434-103434
Maiko Umemura. Peptides derived from Kex2-processed repeat proteins are widely distributed and highly diverse in the Fungi kingdom. Fungal biology and biotechnology. 2020. 7. 11-11

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MISC (63)：

梅村舞子, 萩原大祐, 豊留孝仁, 矢口貴志, 渡辺哲, 亀井克彦. Function and secretory mechanism of cyclic peptides produced by wide variety of fungi. 千葉大学真菌医学研究センター報告. 2023. 26
梅村舞子, 萩原大祐, 豊留孝仁, 矢口貴志, 渡辺哲, 亀井克彦. Biological function of secretory cyclic peptides widely and diversely produced by fungi. 千葉大学真菌医学研究センター報告. 2022. 25
梅村舞子. Cyclic Ribosomal Peptides from Eukaryotes: Attractive Target for Macrocyclic Peptide Construction. 化学と生物. 2022. 60. 6
梅村舞子. Fungi界に特有なペプチド性化合物生合成因子の生物学的機能解明. Institute for Fermentation, Osaka. Research Communications. 2022. 36
梅村舞子, 栗岩薫, 加藤薫, 町田雅之, 五味勝也. Compartmentalized biosynthesis of fungal ribosomal peptides in fungal hyphae. 日本農芸化学会大会講演要旨集(Web). 2022. 2022

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Patents (7)：

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Lectures and oral presentations (93)：

自然言語処理技術を用いた天然物の生合成遺伝子クラスターの設計に向けた研究
(第23回糸状菌分子生物学コンファレンス 2024)
Towards the Design of Biosynthetic Gene Clusters Using Natural Language Processing Technology
(2024)
The pathway information of fungal RiPPs accumulated in five years
(2024)
Detecting, predicting, and generating biosynthetic gene clusters using large natural-language model
(Directing Biosynthesis VII 2024)
生物オミクス情報を利用した新規二次代謝生合成クラスの発見
(日本農芸化学会2024年度大会 2024)

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