Research theme for competitive and other funds (5)：
2021 - 2024 大規模ゲノム情報を利用した大腸菌における血清型変換の全貌解明
2018 - 2021 Analysis of inter-phage interaction and its impacts on the evolution of enterohemorrhagic E. coli
2016 - 2021 Platform for Advanced Genome Science
2016 - 2018 Preparation of Bordetella pertussis that infects experimental animals by introduction of large DNA fragments from B. bronchiseptica
2014 - 2017 Analyses for the mechanism by which Bordetella pertussis causes paroxysmal coughing
Papers (44)：
Ayumi Mure, Yuki Sugiura, Rae Maeda, Kohei Honda, Nozomu Sakurai, Yuuki Takahashi, Masayoshi Watada, Toshihiko Katoh, Aina Gotoh, Yasuhiro Gotoh, et al. Identification of key yeast species and microbe-microbe interactions impacting larval growth of Drosophila in the wild. eLife. 2023. 12
Debora Satie Nagano, Itsuki Taniguchi, Tomoyuki Ono, Keiji Nakamura, Yasuhiro Gotoh, Tetsuya Hayashi. Systematic analysis of plasmids of the Serratia marcescens complex using 142 closed genomes. Microbial genomics. 2023. 9. 11
Miki Okuno, Yoko Arimizu, Seina Miyahara, Yuki Wakabayashi, Yasuhiro Gotoh, Shuji Yoshino, Tetsuya Harada, Kazuko Seto, Takeshi Yamamoto, Keiji Nakamura, et al. Escherichia cryptic clade I is an emerging source of human intestinal pathogens. BMC Biology. 2023. 21. 1
Yasuhiro Gotoh, Ai Takano, Masako Andoh, Kentaro Kasama, Keiji Nakamura, Shuji Ando, Tetsuya Hayashi. Phylogenic position and low genomic diversity of “ Candidatus Rickettsia kotlanii ” inferred by complete genome sequences of two Japanese isolates. Microbiology and Immunology. 2023
Bungo Yano, Itsuki Taniguchi, Yasuhiro Gotoh, Tetsuya Hayashi, Keiji Nakamura. Dynamic changes in Shiga toxin (Stx) 1 transducing phage throughout the evolution of O26:H11 Stx-producing Escherichia coli. Scientific Reports. 2023. 13. 1
Yukari Tanaka, Riu Yamashita, Junko Kawashima, Hiroshi Mori, Ken Kurokawa, Shinji Fukuda, Yasuhiro Gotoh, Keiji Nakamura, Tetsuya Hayashi, Yoshiyuki Kasahara, et al. Further notice of omics profiles of fecal and oral microbiota change in irritable bowel syndrome patients with diarrhea and symptom exacerbation. Journal of Gastroenterology. 2023
Re-activation of lactose hydrolysis in E. coli O121:H19 by excision of insertion sequence
(The 95th annual meeting of Japanese society for bacteriology 2022)
Prophages in prophages: a mechanism to accumulate T3SS effector and stx genes in E. coli
(The 94th annual meeting of Japanese society for bacteriology 2021)
The mechanism responsible for the change in lactose hydrolysis during EHEC O121:19 cultivation
(The 93rd annual meeting of Japanese society for bacteriology 2020)
