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J-GLOBAL ID：202301009039912142 Update date: Apr. 07, 2025

Ishitani Ryuichiro

イシタニリュウイチロウ | Ishitani Ryuichiro

Affiliation and department：
Job title： Professor
Research theme for competitive and other funds (15)：

2024 - 2027 Development of innovative therapies targeting mitochondrial regulation by one-carbon metabolic enzyme
2016 - 2021 Elucidation of MAPK signaling pathways and biological processes based on mathematical science
2016 - 2021 Molecular mechanism of membrane proteins regulated by physical stimuli
2017 - 2020 Structural biology of membrane transporters involved in the efflux mechanism of organic molecules
2016 - 2019 Structural and functional analyses of organic acid exporters for efficient organic acid production

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Papers (172)：

Ryuichiro Ishitani, Mizuki Takemoto, Kentaro Tomii. Protein ligand binding site prediction using graph transformer neural network. PloS one. 2024. 19. 8. e0308425
Ryuichiro Ishitani, Toshiki Kataoka, Kentaro Rikimaru. Molecular Design Method Using a Reversible Tree Representation of Chemical Compounds and Deep Reinforcement Learning. Journal of chemical information and modeling. 2022. 62. 17. 4032-4048
So Takamoto, Chikashi Shinagawa, Daisuke Motoki, Kosuke Nakago, Wenwen Li, Iori Kurata, Taku Watanabe, Yoshihiro Yayama, Hiroki Iriguchi, Yusuke Asano, et al. Towards universal neural network potential for material discovery applicable to arbitrary combination of 45 elements. Nature communications. 2022. 13. 1. 2991-2991
Rieko Suenaga, Mizuki Takemoto, Asuka Inoue, Ryuichiro Ishitani, Osamu Nureki. Lateral access mechanism of LPA receptor probed by molecular dynamics simulation. PloS one. 2022. 17. 2. e0263296
Kazumasa Oda, Takashi Nomura, Takanori Nakane, Keitaro Yamashita, Keiichi Inoue, Shota Ito, Johannes Vierock, Kunio Hirata, Andrés D Maturana, Kota Katayama, et al. Time-resolved serial femtosecond crystallography reveals early structural changes in channelrhodopsin. eLife. 2021. 10

MISC (62)：

渡辺藍子, 齋藤未怜, 森脇由隆, 石谷隆一郎, 松田憲之. パーキンソン病の原因因子DJ-1が持つcPGA分解酵素活性の分子機構. 日本分子生物学会年会プログラム・要旨集(Web). 2024. 47th
松田憲之, 荻原禅, 渡辺藍子, 齋藤未怜, 森脇由隆, 石谷隆一郎, 小迫英尊. 遺伝性潜性パーキンソン病の原因因子DJ-1の分子機能の解明とそのオルガネラ機能に関する考察. 日本分子生物学会年会プログラム・要旨集(Web). 2024. 47th
田中良樹, 氏原一哉, 坂井直樹, 山田悠介, 武本瑞貴, 森脇寛智, 佐藤匡史, STANFIELD Joshua Kyle, 梅本直, 平田邦生, et al. Structure Based Discovery of Novel ALS Inhibitors. 日本農薬学会大会講演要旨集(CD-ROM). 2023. 48th
石谷隆一郎. キャリアデザイン談話室(14)プランド・ハップンスタンス理論のすすめ-An Encouragement of Planned Happenstance Theory. 生物物理 / 日本生物物理学会編. 2022. 62. 6. 367-369
田中良樹, 氏原一哉, 坂井直樹, 山田悠介, 武本瑞貴, 森脇寛智, 佐藤匡史, STANFIELD JK, 平田邦生, 竹下浩平, et al. タンパク質立体構造情報を利用した新規ALS阻害型除草剤の探索. 日本結晶学会年会講演要旨集. 2022. 2022

Books (2)：

AlphaFold時代の構造バイオインフォマティクス実践ガイド : 今日からできる!構造データの基本操作から相互作用の推定、タンパク質デザインまで
羊土社 2024 ISBN:9784758122764
高精度タンパク質構造モデリングおよび構造評価手法の開発
清水謙多郎 2008

Works (1)：

Work history (1)：

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