Rchr
J-GLOBAL ID：201201098055710310
Update date: Apr. 15, 2024
Kodera Noriyuki
コデラ ノリユキ | Kodera Noriyuki
Affiliation and department：
Job title：
Professor
Homepage URL (1)：
http://ridb.kanazawa-u.ac.jp/public/detail.php?id=3403&page=1&search=1&keyword=Kodera&andor=AND&tgt1=1&tgt2=&tgt3=&tgt4=
Research field (1)：
Biophysics
Research keywords (5)：
High-speed Atomic Force Microscopy
, Single-molecule measurement
, 生物物理
, 原子間力顕微鏡
, 分子モーター
Research theme for competitive and other funds (19)：
- 2022 - 2028 天然変性蛋白質(IDP)を標的とする、中分子化合物による、新しい創薬フィールドの開拓
- 2023 - 2026 ABCA1による高密度リポ蛋白質(HDL)産生メカニズムの可視化
- 2022 - 2024 Structural Chemistry of the Fusion Protein Responsible for Ewing's Sarcoma Using State-of-the-Art Measurement Techniques
- 2020 - 2024 Development of the next-generation high-speed AFM and detailed dynamic behavior analysis of biomolecules
- 2018 - 2023 Uncovering the secrets of lipid-transporting ABC proteins
- 2018 - 2023 高速原子間力顕微鏡1分子計測のデータ同化による生体分子4次元構造解析法の開発
- 2017 - 2020 Direct observation of strain-dependent dynamic behaviors of biomolecules by high-speed AFM
- 2016 - 2019 Biochemical characterizations of the cohesin ring for understanding the establishment mechanism of sister chromatid cohesion
- 2016 - 2019 Ultrastructural analysis of the virus ribonucleoprotein complexes by high-speed atomic force microsccopy
- 2015 - 2018 Study of protein-assemble/disassemble on biological membrane depending on the membrane shape by high-speed AFM
- 2014 - 2018 Elucidation of molecular mechanisms of RNA silencing
- 2012 - 2017 Generalization of harmonized supramolecular motility machinery and its diversity
- 2012 - 2017 Mechanism of Mycoplasma gliding
- 2012 - 2017 Opening up New Structural Biology by High-speed AFM
- 2013 - 2017 Elucidation of chemomechanical coupling mechanism of myosin V by advanced high-speed atomic force microscopy
- 2012 - 2015 Study on the motile mechanisms for processive myosins with short legs using high-speed atomic force microscopy
- 2012 - 2013 Studies on the functional mechanism of biomolecules by high-speed atomic force microscopy
- 2010 - 2012 Study of motile mechanism of myosin VI using high-speed atomic force microscopy
- 2005 - 2006 高速原子間力顕微鏡の開発とタンパク質分子のナノ動態解析
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Papers (108)：
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Shin Morioka, Takumi Oishi, Suguru Hatazawa, Takahiro Kakuta, Tomoki Ogoshi, Kenichi Umeda, Noriyuki Kodera, Hitoshi Kurumizaka, Mikihiro Shibata. High-Speed Atomic Force Microscopy Reveals the Nucleosome Sliding and DNA Unwrapping/Wrapping Dynamics of Tail-less Nucleosomes. Nano Letters. 2024
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Romain Amyot, Noriyuki Kodera, Holger Flechsig. Atom Filtering Algorithm and GPU-Accelerated Calculation of Simulation Atomic Force Microscopy Images. Algorithms. 2024
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Tareg Omer Mohammed, You-Rong Lin, Lucky Akter, Kai Weissenbruch, Kien Xuan Ngo, Yanjun Zhang, Noriyuki Kodera, Martin Bastmeyer, Yusuke Miyanari, Azuma Taoka, et al. S100A11 promotes focal adhesion disassembly via myosin II-driven contractility and Piezo1-mediated Ca2+ entry. Journal of Cell Science. 2024. 137. 2
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Kazusa Takeda, Holger Flechsig, Ikumi Muro, Romain Amyot, Fuminori Kobayashi, Noriyuki Kodera, Toshio Ando, Hiroki Konno. Structural Dynamics of E6AP E3 Ligase HECT Domain and Involvement of a Flexible Hinge Loop in the Ubiquitin Chain Synthesis Mechanism. Nano letters. 2023. 23. 24. 11940-11948
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Ayumi Sumino, Takashi Sumikama, Yimeng Zhao, Holger Flechsig, Kenichi Umeda, Noriyuki Kodera, Motoyuki Hattori, Mikihiro Shibata. High-speed AFM reveals fluctuations and dimer splitting of the N-terminal domain of GluA2-γ2. bioRxiv. 2023
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MISC (110)：
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小野賢二郎, 中山隆宏, 辻まゆみ, 梅田健一, 小口達敬, 紺野宏記, 篠原もえ子, 木内祐二, 古寺哲幸, TEPLOW David B. 高速原子間力顕微鏡を用いたAβプロトフィブリルの構造動態とレカネマブの作用. Dementia Japan. 2023. 37. 4
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UMEDA Kenichi, KUROKAWA Yumiko, MURAYAMA Yasuto, KODERA Noriyuki. Real-time visualization of Structural Maintenance of Chromosomes (SMC) complexes by high-speed atomic force microscopy. 日本蛋白質科学会年会プログラム・要旨集. 2023. 23rd (CD-ROM)
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MCARTHUR Steven John, KODERA Noriyuki. High-speed atomic force microscopy enables real time observation of the dynamic structure of individual dengue virus particles. 日本ウイルス学会学術集会プログラム・予稿集(Web). 2023. 70th
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古寺哲幸. Single-molecule imaging of flexible biological molecules in action by high-speed atomic force microscope. 日本化学会春季年会講演予稿集(Web). 2023. 103rd
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小林菜々子, 九笹加菜, 今井大達, 川合志朋, 稲津明広, 今井賢一郎, 古寺哲幸, 遠藤斗志也, 遠藤斗志也, 荒磯裕平. ミトコンドリア膜透過装置TOM複合体の高速原子間力顕微鏡解析. 日本蛋白質科学会年会プログラム・要旨集. 2023. 23rd (CD-ROM)
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Patents (14)：
Books (11)：
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相分離生物学の全貌
東京化学同人 2020 ISBN:9784807913466
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イメージング時代の構造生命科学 : 細胞の動態、膜のないオルガネラ、分子の構造変化をトランススケールに観る
羊土社 2020 ISBN:9784758103855
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The Role of Water in ATP Hydrolysis Energy Transduction by Protein Machinery
Springer Singapore 2018 ISBN:9789811084591
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CSJカレントレビュー26分子マシンの科学
化学同人 2017 ISBN:9784759813869
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天然物の化学-魅力と展望-
東京化学同人 2016 ISBN:9784807915019
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Lectures and oral presentations (107)：
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Video imaging of biological molecules in action by high-speed AFM
(NanospecFY2023 2024)
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高速AFMによる液中ナノメートル世界の動画観察
(メイワフォーシス特別講演ウェビナー 2024)
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高速バイオ原子間力顕微鏡による生体分子の動態観察
(公開シンポジウム「酵素・タンパク質複合体の観察と解析技術の最前線」 2023)
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Improvement of the Z-scanner system for faster high-speed AFM
(2023)
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High-speed AFM imaging of the cholesterol transporter ABCA1 reconstituted in lipid membrane patch
(2023)
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Education (3)：
- 2003 - 2005 Kanazawa University Graduate School of Natural Science and Technology
- 2001 - 2003 Kanazawa University Graduate School of Natural Science and Technology Division of Mathematics and Physical Sciences
- 1997 - 2001 Kanazawa University Faculty of Science Department of Physics
Professional career (1)：
Work history (5)：
- 2018/04 - 現在 Kanazawa University
- 2018/03 - 2018/03 Kanazawa University Institute of Science and Engineering
- 2011/08 - 2018/03 Kanazawa University
- 2010/10 - 2011/07 Kanazawa University
- 2010/04 - 2010/09 Kanazawa University Institute of Science and Engineering
Committee career (5)：
- 2019 - 現在 日本生物物理学会 理事
- 2018 - 2019 日本生物物理学会 分野別専門員(表面探針顕微鏡(STM, AFM等))
- 2016 - 2017 日本生物物理学会 分野別専門員(表面探針顕微鏡(STM, AFM等))
- 2014 - 2015 日本生物物理学会 分野別専門員(表面探針顕微鏡(STM, AFM等))
- 2012 - 2013 日本生物物理学会 地区編集委員
Awards (7)：
Association Membership(s) (2)：
THE JAPAN SOCIETY OF APPLIED PHYSICS
, THE BIOPHYSICAL SOCIETY OF JAPAN
