Rchr
J-GLOBAL ID:201601014828632498
Update date: Dec. 11, 2024
Daisuke Komura
コウムラ ダイスケ | Daisuke Komura
Affiliation and department:
Job title:
Junior Associate Professor
Research field (4):
Human pathology
, Biological, health, and medical informatics
, Intelligent informatics
, Systems genomics
Research keywords (4):
Digital Pathology
, Bioinformatics
, Computer Vision
, Machine leanring
Research theme for competitive and other funds (5):
- 2021 - 2025 深層テクスチャを用いたがん病理組織像の大規模解析基盤の構築と検証
- 2018 - 2021 胸腔系浸潤肺癌PDXのCASTIN解析によるがん幹細胞いかり分子機構の解明
- 2017 - 2020 1細胞がんー間質相互作用解析による抗癌剤耐性克服ターゲットの探索
- 2016 - 2019 The analyses of epithelial-mesenchymal transition associating with LIM protein family ZNF185 using in vivo liver metastasis mouse models of the human pancreas cancer.
- 2016 - 2018 Deep Learningを用いたデジタル病理画像からの遺伝子変異推定
Papers (80):
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Tong Ding, Sophia J. Wagner, Andrew H. Song, Richard J. Chen, Ming Y. Lu, Andrew Zhang, Anurag J. Vaidya, Guillaume Jaume, Muhammad Shaban, Ahrong Kim, et al. Multimodal Whole Slide Foundation Model for Pathology. 2024
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Seiei Torazawa, Satoru Miyawaki, Hideaki Imai, Hiroki Hongo, Daiichiro Ishigami, Masahiro Shimizu, Yu Sakai, Shotaro Ogawa, Satoshi Kiyofuji, Satoshi Koizumi, et al. Association of rare variants in RNF213 with severe progression of intracranial artery stenosis in quasi-moyamoya disease. Journal of neurosurgery. 2024. 1-10
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Yudai Hirano, Satoru Miyawaki, Yu Sakai, Yu Teranishi, Atsushi Okano, Motoyuki Umekawa, Hiroki Hongo, Seiei Torazawa, Shotaro Ogawa, Daisuke Komura, et al. Genetic analysis of foramen magnum meningiomas reveals AKT1 mutations uncomplicated by TRAF7 mutations. Acta neuropathologica communications. 2024. 12. 1. 123-123
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Mieko Ochi, Daisuke Komura, Shumpei Ishikawa. Pathology Foundation Models. 2024
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Ranny R Herdiantoputri, Daisuke Komura, Mieko Ochi, Yuki Fukawa, Kou Kayamori, Maiko Tsuchiya, Yoshinao Kikuchi, Tetsuo Ushiku, Tohru Ikeda, Shumpei Ishikawa. Benchmarking Deep Learning-Based Image Retrieval of Oral Tumor Histology. Cureus. 2024. 16. 6. e62264
more...
MISC (34):
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Daisuke Komura, Shumpei Ishikawa. Meet the authors: Daisuke Komura and Shumpei Ishikawa. Patterns (New York, N.Y.). 2023. 4. 7. 100794-100794
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河村大輔, 石川俊平. 腫瘍微小環境の空間トランスクリプトーム解析. 遺伝子医学. 2023. 13. 3. 78-83
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渡部 朱織, 菊地 良直, 河村 大輔, 宇於崎 宏. 大腸癌と胃癌の播種巣における中皮間葉転換の誘導と免疫抑制微小環境の形成. 日本病理学会会誌. 2023. 112. 1. 278-278
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越智 三枝子, 河村 大輔, 斧山 巧, 新保 幸輝, 遠藤 春哉, 牛久 哲男, 石川 俊平. 多種撮像媒体および染色条件による多様なH&E染色病理画像データセットの構築とその活用. 日本病理学会会誌. 2023. 112. 1. 339-339
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河村 大輔, 斧山 巧, 越智 三枝子, 加藤 洋人, 牛久 哲男, 石川 俊平. 同一標本に対するH&E染色と免疫染色を利用した細胞セグメンテーションのためのがん病理組織像データセットの開発(SegPath: cancer histopathology dataset for cell segmentation using H&E staining and immunostaining on the same specimen). 日本病理学会会誌. 2022. 111. 2. 121-121
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Patents (7):
Books (3):
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医療とAI最前線 先進医療NAVIGATOR
日本医学出版 2022 ISBN:4865770496
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動き始めたがんゲノム医療 : 深化と普及のための基礎研究課題
羊土社 2018 ISBN:9784758103732
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Molecular Pathology or Cancer Genomics
2012
Lectures and oral presentations (108):
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High-throughput analysis of antibodies for data-driven design
(18th International Conference on Biomedical Engineering (ICBME 2024) 2024)
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Comprehensive analysis of the diversity of gastric cancer genomes and cancer-stromal interactions by single-cell spatial transcriptomics
(36th EORTC-NCI-AACR SYMPOSIUM on molecular targets and cancer therapeutics 2024)
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scRNA-seq and single-cell spatial transcriptome of diffuse-type gastric cancer mouse model reveals a novel interaction between neutrophils and cancer cells
(36th EORTC-NCI-AACR SYMPOSIUM on molecular targets and cancer therapeutics 2024)
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Enhanced Interpretability in Histopathological Images via Combined Tissue and Cell-Level Graph Analysis
(The Third Workshop on Applications of Medical AI (AMAI) in MICCAI 2024)
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Pre-Clinical Evaluation of Content-based Image Retrieval System for Pathological Diagnosis
(The Third Workshop on Applications of Medical AI (AMAI) in MICCAI 2024)
more...
Works (4):
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deeptexture : Tools for deep texture representation for histology images
2023 - 現在
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Viola: flexible and powerful python package designed specifically for analysis of genomic structural variant (SV) signatures
2022 - 現在
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Luigi : Large-scale histopathological image retrieval system
2018 - 現在
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GEMCA: Genotyping Microarray based CNV Analysis
2006 -
Professional career (1):
Work history (5):
- 2024/11 - 現在 The University of Tokyo Graduate School of Medicine, Department of Preventive Medicine Junior Associate Professor
- 2018/12 - 2024/10 The University of Tokyo Graduate School of Medicine
- 2016/04 - 2018/11 Tokyo Medical and Dental University Medical Research Institute
- 2015/04 - 2016/03 Tokyo Medical and Dental University Medical Research Institute
- 2007/04 - 2009/02 NEC Corporation Central Research Laboratories
Committee career (3):
- 2024/04 - 現在 日本病理学会 学術評議員
- 2023/06 - 現在 日本病理学会 病理AIガイドライン策定ワーキンググループ 委員
- 2023/09 - 2024/10 BMC Cancer Editorial Board Member
Awards (1):
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