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J-GLOBAL ID:202101013476683597 Update date: Jan. 12, 2025

Ohta Tazro

オオタ タツロウ | Ohta Tazro
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Papers (33)

  • Shuya Ikeda, Kiyoko F. Aoki-Kinoshita, Hirokazu Chiba, Susumu Goto, Masae Hosoda, Shuichi Kawashima, Jin-Dong Kim, Yuki Moriya, Tazro Ohta, Hiromasa Ono, et al. Expanding the concept of ID conversion in TogoID by introducing multi-semantic and label features. Journal of Biomedical Semantics. 2025. 16. 1
  • Yuka MASAMURA, Ryuichi KUBO, Yuki MIDORIKAWA, Natsuko O SHINOZAKI, Satoshi WATANABE, Sayumi MAEKAWA, Aya K TAKEDA, Tazro OHTA. Differences in the human gut microbiota with varying depressive symptom severity scores. Bioscience of Microbiota, Food and Health. 2024
  • Zhaonan Zou, Tazro Ohta, Shinya Oki. ChIP-Atlas 3.0: a data-mining suite to explore chromosome architecture together with large-scale regulome data. Nucleic Acids Research. 2024. 52. W1. W45-W53
  • Mats Perk, Arun Isaac, Tazro Ohta, Egon Willighagen, Leyla Jael Castro, Toshiaki Katayama, Pjotr Prins. Metadata handling for BioHackathon publications through BioHackrXiv. 2024
  • Tazro Ohta, Ayaka Hananoe, Ayano Fukushima-Nomura, Koichi Ashizaki, Aiko Sekita, Jun Seita, Eiryo Kawakami, Kazuhiro Sakurada, Masayuki Amagai, Haruhiko Koseki, et al. Best practices for multimodal clinical data management and integration: An atopic dermatitis research case. Allergology international : official journal of the Japanese Society of Allergology. 2023
  • Hirotaka Suetake, Tsukasa Fukusato, Takeo Igarashi, Tazro Ohta. A workflow reproducibility scale for automatic validation of biological interpretation results. GigaScience. 2023. 12
  • Hirotaka Suetake, Tsukasa Fukusato, Takeo Igarashi, Tazro Ohta. Workflow sharing with automated metadata validation and test execution to improve the reusability of published workflows. GigaScience. 2023
  • Egon Willighagen, Tazro Ohta, Leyla Jael Castro, Pjotr Prins. CiTO support for BioHackrXiv. BioHackrXiv. 2023
  • Tazro Ohta, Yuh Shiwa. Hybrid Genome Assembly of Short and Long Reads in Galaxy. Methods in Molecular Biology. 2023. 15-30
  • Pjotr Prins, Tazro Ohta, Leyla Jael Castro, Toshiaki Katayama. Metadata for BioHackrXiv Markdown publications. BioHackrXiv. 2022
  • 高月 照江, 池田 秀也, 井手 隆広, 大田 達郎, 小野 浩雅, 片山 俊明, 川島 秀一, 申 在紋, 建石 由佳, 千葉 啓和, et al. 統合データベース探索フレームワークTogoDXの開発とその応用. トーゴーの日2022. 2022. 1
  • 池田 秀也, 千葉 啓和, 藤原 豊史, 五斗 進, 井手 隆広, 川島 秀一, 箕輪 真理, 三橋 信孝, 守屋 勇樹, 内藤 雄樹, et al. TogoID: データベース統合の基盤となるID変換サービス. トーゴーの日2022. 2022. 1
  • Osamu Nishimura, John Rozewicki, Kazuaki Yamaguchi, Kaori Tatsumi, Yuta Ohishi, Tazro Ohta, Masaru Yagura, Taiki Niwa, Chiharu Tanegashima, Akinori Teramura, et al. Squalomix: shark and ray genome analysis consortium and its data sharing platform. F1000Research. 2022. 11. 1077-1077
  • Hirotaka Suetake, Tomoya Tanjo, Manabu Ishii, Bruno P. Kinoshita, Takeshi Fujino, Tsuyoshi Hachiya, Yuichi Kodama, Takatomo Fujisawa, Osamu Ogasawara, Atsushi Shimizu, et al. Sapporo: A workflow execution service that encourages the reuse of workflows in various languages in bioinformatics. F1000Research. 2022. 11. 889-889
  • Shuya Ikeda, Hiromasa Ono, Tazro Ohta, Hirokazu Chiba, Yuki Naito, Yuki Moriya, Shuichi Kawashima, Yasunori Yamamoto, Shinobu Okamoto, Susumu Goto, et al. TogoID: an exploratory ID converter to bridge biological datasets. Bioinformatics. 2022
  • Zhaonan Zou, Tazro Ohta, Fumihito Miura, Shinya Oki. ChIP-Atlas 2021 update: a data-mining suite for exploring epigenomic landscapes by fully integrating ChIP-seq, ATAC-seq and Bisulfite-seq data. Nucleic acids research. 2022
  • 池田 秀也, 千葉 啓和, 藤原 豊史, 原薗 陛正, 井手 隆広, 片山 俊明, 川島 秀一, 箕輪 真理, 三橋 信孝, 守屋 勇樹, et al. TogoID: データベース統合の基盤となるID変換サービス. トーゴーの日2021. 2021. 1
  • Tiffany Amariuta, Kazuyoshi Ishigaki, Hiroki Sugishita, Tazro Ohta, Masaru Koido, Kushal K. Dey, Koichi Matsuda, Yoshinori Murakami, Alkes L. Price, Eiryo Kawakami, et al. Improving the trans-ancestry portability of polygenic risk scores by prioritizing variants in predicted cell-type-specific regulatory elements. Nature Genetics. 2020. 52. 12. 1346-1354
  • Leyla Jael Castro, Jerven Bolleman, michel dumontier, Simon Jupp, Jose Emilio Labra-Gayo, Thomas Liener, Tazro Ohta, Núria Queralt-Rosinach, Chunlei Wu. Data validation and schema interoperability. 2020
  • Rutger A. Vos, Toshiaki Katayama, Hiroyuki Mishima, Shin Kawano, Shuichi Kawashima, Jin-Dong Kim, Yuki Moriya, Toshiaki Tokimatsu, Atsuko Yamaguchi, Yasunori Yamamoto, et al. BioHackathon 2015: Semantics of data for life sciences and reproducible research. F1000Research. 2020. 9. 136-136

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