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論文 (30件)
- Rintaro Inoue, Takashi Oda, Hiroshi Nakagawa, Taiki Tominaga, Takahisa Ikegami, Tsuyoshi Konuma, Hiroki Iwase, Yukinobu Kawakita, Mamoru Sato, Masaaki Sugiyama. Revealing an origin of temperature-dependent structural change in intrinsically disordered proteins. Biophysical Journal. 2024
- Rintaro Inoue, Tomotaka Oroguchi, Takashi Oda, Bela Farago, Anne Martel, Lionel Porcar, Mamoru Sato, Masaaki Sugiyama. Internal dynamics of multidomain protein as revealed by an optimized neutron spin echo measurement and all-atom molecular dynamics simulation. Physical Review Research. 2023. 5. 4
- Yusuke Nakasone, Hiroto Murakami, Shunrou Tokonami, Takashi Oda, Masahide Terazima. Time-resolved study on signaling pathway of photoactivated adenylate cyclase and its nonlinear optical response. The Journal of biological chemistry. 2023. 105285-105285
- Hideaki Ohtomo, Tsutomu Yamane, Takashi Oda, Noriyuki Kodera, Jun-ichi Kurita, Yasuo Tsunaka, Romain Amyot, Mitsunori Ikeguchi, Yoshifumi Nishimura. Dynamic solution structures of whole human NAP1 dimer bound to one and two histone H2A-H2B heterodimers obtained by integrative methods. Journal of Molecular Biology. 2023. 168189-168189
- Michinari Maekawa, Takashi Oda, Ryo Hanai. Biochemical analysis of the replication initiator protein of staphylococcal plasmid pC194. Biochimie. 2022
- Taiki Tominaga, Hiroshi Nakagawa, Masae Sahara, Takashi Oda, Rintaro Inoue, Masaaki Sugiyama. Data Collection for Dilute Protein Solutions via a Neutron Backscattering Spectrometer. Life (Basel, Switzerland). 2022. 12. 5
- Hitoki Nanaura, Honoka Kawamukai, Ayano Fujiwara, Takeru Uehara, Yuichiro Aiba, Mari Nakanishi, Tomo Shiota, Masaki Hibino, Pattama Wiriyasermkul, Sotaro Kikuchi, et al. C9orf72-derived arginine-rich poly-dipeptides impede phase modifiers. Nature communications. 2021. 12. 1. 5301-5301
- Rintaro Inoue, Takashi Oda, Hiroshi Nakagawa, Taiki Tominaga, Tomohide Saio, Yukinobu Kawakita, Masahiro Shimizu, Aya Okuda, Ken Morishima, Nobuhiro Sato, et al. Dynamics of proteins with different molecular structures under solution condition. Scientific reports. 2020. 10. 1. 21678-21678
- Noriyuki Kodera, Daisuke Noshiro, Sujit K Dora, Tetsuya Mori, Johnny Habchi, David Blocquel, Antoine Gruet, Marion Dosnon, Edoardo Salladini, Christophe Bignon, et al. Structural and dynamics analysis of intrinsically disordered proteins by high-speed atomic force microscopy. Nature nanotechnology. 2020. 16. 2. 181-189
- Satomi Kori, Tomohiro Jimenji, Toru Ekimoto, Miwa Sato, Fumie Kusano, Takashi Oda, Motoko Unoki, Mitsunori Ikeguchi, Kyohei Arita. Serine 298 Phosphorylation in Linker 2 of UHRF1 Regulates Ligand-Binding Property of Its Tandem Tudor Domain. Journal of Molecular Biology. 2020. 14. 432. 59-77
- Charoenwattanasatien R, Zinzius K, Scholz M, Wicke S, Tanaka H, Brandenburg JS, Marchetti GM, Ikegami T, Matsumoto T, Oda T, et al. Calcium sensing via EF-hand 4 enables thioredoxin activity in the sensor-responder protein calredoxin in the green alga Chlamydomonas reinhardtii. The Journal of biological chemistry. 2019. 295. 1. 170-180
- Kori S, Ferry L, Matano S, Jimenji T, Kodera N, Tsusaka T, Matsumura R, Oda T, Sato M, Dohmae N, et al. Structure of the UHRF1 Tandem Tudor Domain Bound to a Methylated Non-histone Protein, LIG1, Reveals Rules for Binding and Regulation. Structure (London, England : 1993). 2019. 27. 3. 485-496.e7
- Hayashi I, Oda T, Sato M, Fuchigami S. Cooperative DNA Binding of the Plasmid Partitioning Protein TubR from the Bacillus cereus pXO1 Plasmid. Journal of molecular biology. 2018. 430. 24. 5015-5028
- Kosuke Oda, Takashi Oda, Yasuyuki Matoba, Mamoru Sato, Takashi Irie, Takemasa Sakaguchi. Structural analysis of the STAT1:STAT2 heterodimer revealed the mechanism of Sendai virus C protein-mediated blockade of type 1 interferon signaling. JOURNAL OF BIOLOGICAL CHEMISTRY. 2017. 292. 48. 19752-19766
- Masakazu Furuta, Aira Matsugaki, Takayoshi Nakano, Isao Hirata, Koichi Kato, Takashi Oda, Mamoru Sato, Masayuki Okazaki. Molecular level analyses of mechanical properties of PTFE sterilized by Co-60 gamma-ray irradiation for clinical use. RADIATION PHYSICS AND CHEMISTRY. 2017. 139. 126-131
- Takashi Oda, Hirokazu Hirabayashi, Gen Shikauchi, Ryouma Takamura, Kiyoshi Hiraga, Hiroshi Minami, Hiroshi Hashimoto, Masafumi Yamamoto, Keiji Wakabayashi, Toshiyuki Shimizu, et al. Structural basis of autoinhibition and activation of the DNA-targeting ADP-ribosyltransferase pierisin-1. JOURNAL OF BIOLOGICAL CHEMISTRY. 2017. 292. 37. 15445-15455
- Chang Hwa Jo, Jonghyeon Son, Sulhee Kim, Takashi Oda, Jaehoon Kim, Myoung-Ro Lee, Mamoru Sato, Hyun Tae Kim, Satoru Unzai, Sam-Yong Park, et al. Structural insights into a 20.8-kDa tegumental-allergen-like (TAL) protein from Clonorchis sinensis. SCIENTIFIC REPORTS. 2017. 7. 1. 1764
- Shimojo H, Kawaguchi A, Oda T, Hashiguchi N, Omori S, Moritsugu K, Kidera A, Hiragami-Hamada K, Nakayama J, Sato M, et al. Extended string-like binding of the phosphorylated HP1α N-terminal tail to the lysine 9-methylated histone H3 tail. Scientific reports. 2016. 6. 22527
- Hisashi Yoshida, Sam-Yong Park, Takashi Oda, Taeko Akiyoshi, Mamoru Sato, Mikako Shirouzu, Kengo Tsuda, Kanako Kuwasako, Satoru Unzai, Yutaka Muto, et al. A novel 3 ' splice site recognition by the two zinc fingers in the U2AF small subunit. GENES & DEVELOPMENT. 2015. 29. 15. 1649-1660
- Yasuhiro Arimura, Hiroshi Kimura, Takashi Oda, Koichi Sato, Akihisa Osakabe, Hiroaki Tachiwana, Yuko Sato, Yasuha Kinugasa, Tsuyoshi Ikura, Masaaki Sugiyama, et al. Structural basis of a nucleosome containing histone H(2)A.B/H(2)A.Bbd that transiently associates with reorganized chromatin (vol 3, 3510, 2013). SCIENTIFIC REPORTS. 2015. 5. 9628
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