Abe Akira

アベアキラ | Abe Akira

Affiliation and department：
Homepage URL (1)： https://genome.ibrc.or.jp

Research field (1)： Plant genetics and breeding

Research keywords (5)： Rice , Millet , Genomics , Plant Breeding , NGS

Research theme for competitive and other funds (14)：

2024 - 2029 Exploring rice NLRome - pathogen effector interactions to enhance food security
2024 - 2028 Development of multi-environment prediction system of flowering time for diverse rice genomes based on three-dimensional regression modeling
2024 - 2027 Metabolic-gene network that governs adaptation to rising atmospheric CO2 concentration in rice
2024 - 2026 イネNAM集団を用いた高精度ゲノミックデザインモデルの構築と有用ハプロタイプの解明
2023 - 2026 Identification of candidate genes for quantitative traits and evaluation of genetic resource diversity of a novel model plant, Setaria, using NGS

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Papers (41)：

Yusaku Sugimura, Kaori Oikawa, Yu Sugihara, Hiroe Utsushi, Eiko Kanzaki, Kazue Ito, Yumiko Ogasawara, Tomoaki Fujioka, Hiroki Takagi, Motoki Shimizu, et al. Impact of rice GENERAL REGULATORY FACTOR14h (GF14h) on low-temperature seed germination and its application to breeding. PLOS Genetics. 2024. 20. 8. e1011369-e1011369
Toshiyuki Sakai, Tomoaki Fujioka, Toyokazu Uemura, Shinichi Saito, Ryohei Terauchi, Akira Abe. Whole-genome analysis of recombinant inbred rice lines reveals a quantitative trait locus on chromosome 3 with genotype-by-environment interaction effects. G3 (Bethesda, Md.). 2023. 13. 6
Basavaraj Kovi, Toshiyuki Sakai, Akira Abe, Eiko Kanzaki, Ryohei Terauchi, Motoki Shimizu. Isolation of Pikps, an allele of Pik, from the aus rice cultivar Shoni. Genes & genetic systems. 2023
Satoshi Natsume, Kaori Oikawa, Chihiro Nomura, Kazue Ito, Hiroe Utsushi, Motoki Shimizu, Ryohei Terauchi, Akira Abe. V-primer: software for the efficient design of genome-wide InDel and SNP markers from multi-sample variant call format (VCF) genotyping data. Breeding Science. 2023. 73. 4. 415-420
Yu Sugihara, Yoshiko Abe, Hiroki Takagi, Akira Abe, Motoki Shimizu, Kazue Ito, Eiko Kanzaki, Kaori Oikawa, Jiorgos Kourelis, Thorsten Langner, et al. Disentangling the complex gene interaction networks between rice and the blast fungus identifies a new pathogen effector. PLoS biology. 2023. 21. 1. e3001945

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MISC (19)：

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Books (3)：

Rice Genomics, Genetics and Breeding
Springer 2018
次世代シークエンス解析スタンダード
羊土社 2014
The handbook of plant mutation screening : mining of natural and induced alleles
Wiley-VCH 2010 ISBN:3527326049

Lectures and oral presentations (16)：

Yielding ability and physicochemical characteristics related to eating quality in salt-tolerant rice variety "Kaijin" under normal salt-free cultivated condition
(Tohoku Journal of Crop Science 2016)
Nested association mapping of panicle architecture in rice
(Abstracts of Meeting of the CSSJ 2016)
イネNested Association Mapping集団による農業形質の遺伝解析
(育種学研究 2016)
ギニアヤムのゲノム解析
(日本植物細胞分子生物学会大会・シンポジウム講演要旨集 2016)
Improvement of Rice Seedling Establishment in Direct Seeding Cultivation Using NIL with a QTL "<i>qPHS3-2</i>" that Controls Seedling Vigor
(Tohoku Journal of Crop Science 2015)

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Professional career (1)：

Awards (2)：

Association Membership(s) (3)：

MILLET SOCIETY OF JAPAN , CROP SCIENCE SOCIETY OF JAPAN , JAPANESE SOCIETY OF BREEDING

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