Research theme for competitive and other funds (3)：
2022 - 2025 A multi-omics study on multiple system atrophy patients with family history
2021 - 2024 転写ユニティー機構を構築する多因子間相互作用の時空間的かつ定量的解明
2021 - 2023 Development of data analysis platform technology for data-driven genomic breeding
Papers (100)：
Nejc Haberman, Holly Digby, Rupert Faraway, Rebecca Cheung, Anob M. Chakrabarti, Andrew M. Jobbins, Callum Parr, Kayoko Yasuzawa, Takeya Kasukawa, Chi Wai Yip, et al. Widespread 3′UTR capped RNAs derive from G-rich regions in proximity to AGO2 binding sites. BMC Biology. 2024. 22. 1
Saumya Agrawal, Andrey Buyan, Jessica Severin, Masaru Koido, Tanvir Alam, Imad Abugessaisa, Howard Y. Chang, Josée Dostie, Masayoshi Itoh, Juha Kere, et al. Annotation of nuclear lncRNAs based on chromatin interactions. PLOS ONE. 2024. 19. 5. e0295971-e0295971
Imad Abugessaisa, Ri-Ichiroh Manabe, Tsugumi Kawashima, Michihira Tagami, Chitose Takahashi, Yasushi Okazaki, Stefania Bandinelli, Takeya Kasukawa, Luigi Ferrucci. OVCH1 Antisense RNA 1 is differentially expressed between non-frail and frail old adults. GeroScience. 2024. 46. 2. 2063-2081
Jonathan Moody, Tsukasa Kouno, Miki Kojima, Ikuko Koya, Julio Leon, Akari Suzuki, Akira Hasegawa, Taishin Akiyama, Nobuko Akiyama, Masayuki Amagai, et al. A single-cell atlas of transcribedcis-regulatory elements in the human genome. 2023
Abugessaisa I, Noguchi S, Carninci P, Kasukawa T. The FANTOM5 Computation Ecosystem: Genomic Information Hub for Promoters and Active Enhancers. Methods in molecular biology (Clifton, N.J.). 2017. 1611. 199-217
T. Kasukawa, M. Lizio, J. Harshbarger, S. Hisashi, J. Severin, A. Imad, S. Sahin, T. C. Freeman, K. Baillie, A. Sandelin, et al. FANTOM5 web resource for the large-scale genome-wide transcription start site activity profiles of wide-range of mammalian cells. HUMAN GENOMICS. 2016. 10
Updating a data warehouse with low traffic cost
(IPSJ SIG Notes 1997)
Professional career (1)：
Ph.D (informatics) (Osaka University)
Work history (8)：
2022/04 - 現在 Yokohama City University Graduate School of Medical Life Science Visiting Professor
2019/10 - 現在 RIKEN RIKEN Center for Integrative Medical Sciences Team Leader
2018/10 - 現在 Osaka University Institute for Protein Research Visiting Professor
2018/04 - 2019/09 RIKEN RIKEN Center for Integrative Medical Sciences Unit Leader
2013/04 - 2018/03 RIKEN Center for Life Science Technology Unit Leader
2005/04 - 2013/03 RIKEN Center for Developmental Biology Research Scientist
2000/04 - 2005/03 NTT Software Corporation
1998/04 - 2000/03 Osaka University Graduate School of Engineering Assistant professor
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Association Membership(s) (4)：
THE INSTITUTE OF ELECTRONICS, INFORMATION AND COMMUNICATION ENGINEERS
, INFORMATION PROCESSING SOCIETY OF JAPAN
, JAPANESE SOCIETY FOR BIOINFORMATICS
, THE MOLECULAR BIOLOGY SOCIETY OF JAPAN
