Rsrc
J-GLOBAL ID:202010006781900000   Research Resource code:NBDC01723 Update date:May. 19, 2019

Bgee DataBase for Gene Expression Evolution: Bgee

Bgee DataBase for Gene Expression Evolution: Bgee
Owning Organization:
  • BGEE administrators
Resource classification: Database
Tag (subject)  (2): Genome/Gene ,  Organism
Tag (data type)  (3): Expression ,  Distribution ,  Classification
Species (17): Anolis carolinensis (NCBI Taxonomy ID: 28377) ,  Bos taurus (NCBI Taxonomy ID: 9913) ,  Caenorhabditis elegans (NCBI Taxonomy ID: 6239) ,  Danio rerio (NCBI Taxonomy ID: 7955) ,  Drosophila melanogaster (NCBI Taxonomy ID: 7227) ,  Gallus gallus (NCBI Taxonomy ID: 9031) ,  Gorilla gorilla gorilla (NCBI Taxonomy ID: 9595) ,  Homo sapiens (NCBI Taxonomy ID: 9606) ,  Macaca mulatta (NCBI Taxonomy ID: 9544) ,  Monodelphis domestica (NCBI Taxonomy ID: 13616) ,  Mus musculus (NCBI Taxonomy ID: 10090) ,  Ornithorhynchus anatinus (NCBI Taxonomy ID: 9258) ,  Pan paniscus (NCBI Taxonomy ID: 9597) ,  Pan troglodytes (NCBI Taxonomy ID: 9598) ,  Rattus norvegicus (NCBI Taxonomy ID: 10116) ,  Sus scrofa (NCBI Taxonomy ID: 9823) ,  Xenopus tropicalis (NCBI Taxonomy ID: 8364)
Overview:
Bgee is a database to retrieve and compare gene expression patterns in multiple animal species, produced from multiple data types (RNA-Seq, Affymetrix, in situ hybridization, and EST data). Bgee is based exclusively on curated "normal", healthy, expression data (e.g., no gene knock-out, no treatment, no disease), to provide a comparable reference of normal gene expression. Bgee produces calls of presence/absence of expression, and of differential over-/under-expression, integrated along with information of gene orthology, and of homology between organs. This allows comparisons of expression patterns between species.
Source: FAIRsharing
Record maintainer: See the corresponding part in the FAIRsharing record
Record license: Creative Commons Attribution and Share-alike (CC-BY-SA) International 4.0 license

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