Art

J-GLOBAL ID：202002275803209553   Reference number：20A2760840

Neuron ID dataset facilitates neuronal annotation for whole-brain activity imaging of C. elegans

ニューロンIDデータセットはC.elegansの全脳活性イメージングのためのニューロンアノテーションを促進する【JST・京大機械翻訳】

Author (15)： Toyoshima Yu (Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan) ,  Wu Stephen (The Institute of Statistical Mathematics, Research Organization of Information and Systems, Tachikawa, Japan) ,  Wu Stephen (The Graduate University for Advanced Studies, SOKENDAI, Mishima, Japan) ,  Kanamori Manami (Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan) ,  Sato Hirofumi (Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan) ,  Jang Moon Sun (Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan) ,  Oe Suzu (Department of Biology, Faculty of Sciences, Kyushu University, Fukuoka, Japan) ,  Murakami Yuko (Department of Biology, Faculty of Sciences, Kyushu University, Fukuoka, Japan) ,  Teramoto Takayuki (Department of Biology, Faculty of Sciences, Kyushu University, Fukuoka, Japan) ,  Park Chanhyun (Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan) ,  Iwasaki Yuishi (Department of Mechanical Systems Engineering, Graduate School of Science and Engineering, Ibaraki University, Hitachi, Japan) ,  Ishihara Takeshi (Department of Biology, Faculty of Sciences, Kyushu University, Fukuoka, Japan) ,  Yoshida Ryo (The Institute of Statistical Mathematics, Research Organization of Information and Systems, Tachikawa, Japan) ,  Yoshida Ryo (The Graduate University for Advanced Studies, SOKENDAI, Mishima, Japan) ,  Iino Yuichi (Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan)
Material： BMC Biology (Web)
Volume： 18  Issue： 1  Page： 1-20  Publication year： 2020 
JST Material Number： U7046A  ISSN： 1741-7007  Document type： Article
Article type： 原著論文  Country of issue： United Kingdom (GBR)  Language： ENGLISH (EN)

Abstract/Point： Annotation of cell identity is...

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Thesaurus term： fluorescence ,  interaction ,  *neuron ,  animal ,  human(primates) ,  *image processing ,  multiplex ,  adult(development) ,  promoter(genetics) ,  neuroscience ,  imago ,  Caenorhabditis elegans ,  *annotation
Semi thesaurus term： 神経活動 ,  脳イメージング , 【Automatic Indexing@JST】

Author keywords (8)： Neuron identification ,  Caenorhabditis elegans ,  Cell-specific promoters ,  Volumetric images ,  Large dataset for cell positions ,  Biological resources ,  Computational method ,  Whole-brain activity imaging

JST classification (4)： Central nervous system  (EJ12030F) ,  Autecology  (EE03020H) ,  Microscopic methods of living organisms  (EA03050C) ,  Nervous system in general  (EJ12010J)

Reference (41)：

• Dev Biol; Post-embryonic cell lineages of the nematode, Caenorhabditis elegans; JE Sulston, HR Horvitz; 56; 1977; 110-156; 10.1016/0012-1606(77)90158-0; citation_id=CR1
• Dev Biol; The embryonic cell lineage of the nematode Caenorhabditis elegans; JE Sulston, E Schierenberg, JG White, JN Thomson; 100; 1983; 64-119; 10.1016/0012-1606(83)90201-4; citation_id=CR2
• White JG, et al. The structure of the nervous system of the nematode Caenorhabditis elegans. Philos Trans R Soc B Biol Sci. 1986;314(1165):1-340. https://doi.org/10.1098/rstb.1986.0056.
• Nat Methods; Brain-wide 3D imaging of neuronal activity in Caenorhabditis elegans with sculpted light; T Schrödel, R Prevedel, K Aumayr, M Zimmer, A Vaziri; 10; 2013; 1013-1020; 10.1038/nmeth.2637; citation_id=CR4
• Nat Methods; Simultaneous whole-animal 3D imaging of neuronal activity using light-field microscopy; R Prevedel, Y-G Yoon, M Hoffmann, N Pak, G Wetzstein, S Kato, T Schrödel, R Raskar, M Zimmer, ES Boyden, A Vaziri; 11; 2014; 727-730; 10.1038/nmeth.2964; citation_id=CR5

Terms in the title (7)： ニューロン ,  IDデータ ,  脳 ,  活性 ,  イメージング ,  アノテーション ,  促進